Mesorhizobium sp. Pch-S: C1M53_12240
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Entry
C1M53_12240 CDS
T05918
Name
(GenBank) GGDEF domain-containing protein
Organism
mesp
Mesorhizobium sp. Pch-S
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_8
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
QAZ43612
UniProt:
A0A4V0YP59
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Position
2644229..2646754
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AA seq
841 aa
AA seq
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MMSIAVRVKELDELARQQQPIESNPSSQADRVFRIDTEFEDVRLMLRRWQAACIDGVLPP
YEELALGSVGRFADELAVVRLSEGHAGFILRAGSRFCSLADIAEASVSLSVLPFAVRRAV
NDAIDLARLAARPYLTLCRSIIDGMVSTMEVLALPLSCRWPGEYFLIFARPRKSQVDLAR
LLINSTDEGILALSPLEGVGTAPRDYQVLSINNAAARMLGAPAENMRLRLLSEVSAAECL
ARLLDQRSRNRSQGPAVPSLELEYDLAGEAISLQVGVVETDGLLAVTLTDVREIRNREVL
FRSLFDDNPVPMYVRHLATGVFLNVNAAALHLYGHDRAAFLALDIRNLEPNSAARVGSSG
ERFARHRTASGAELDVIEYTRAITVGGQPATLSTIVDVTERKRAEERISFLAHHDPLTGV
GNRTTFSQEIEEAVATAVAGHQPFALVLIDLDDFKAVNDTLGHAAGDSLLIETADRIRRL
LRRTDLVARLGGDEFAVLLRGALSRDDVQLLAGRIIQAIAQPHGYEGHKLSIGASLGAAI
APVDAREAGTLLKCADLALYRSKREGKGTFHFFEPEMDAEMRERRELELELRAADFDREL
ELHYQPIISLRSGGLRGFEALVRWRNPRRGMVSPAEFIPLAEETGMIDAIGRWVLEEACR
RAAAWPQDLIIAVNASAVQFRQGRFAETVTQALAASGLDPSRLEIEITESVLLADTGANL
ALLERLKDVGVRVALDDFGTGYSSMSYLRRFPFSRLKIDRSFIRDIGSSRESMAIVRAII
GLSANLGIDTTAEGVETGAQLELLRQERCGEIQGFLFSPPVDSVGALRIIDSYRSDESKV
A
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgattgcagtgcgggtcaaggaactggatgagcttgcgcggcagcagcagccg
atcgagtcaaatccttcgagccaggccgaccgcgtgttccgcatcgacaccgaattcgag
gacgtgcggctgatgttgcgtcgctggcaggcggcatgcatcgacggtgttctcccgcct
tatgaagagttggcgctgggcagcgtcggtcgttttgccgacgaactggcagtggttcgg
ctttcggagggccatgcgggcttcatcctgcgcgccggctcccgcttctgcagcctggca
gacatcgcggaagcctcggtttcgctttccgtcctgccgtttgcggttcgacgcgcggtg
aacgatgccatcgatctcgcgcgtctggctgcgcgaccctatctgaccctgtgccggtcg
atcatcgacggcatggtatcgaccatggaggtgctggcgctgccgctgtcctgtcgctgg
ccaggcgaatatttcctgatcttcgcaaggccgcgcaaaagccaggtcgatctcgcacgt
ctgctcatcaactcgaccgacgagggcattctggcgctgagcccgctggaaggcgttggt
actgcgccgcgcgactatcaggtgctcagcatcaacaatgccgccgccaggatgcttggc
gcaccggcggaaaacatgcgcctgcgcctgttgtccgaggtaagcgcggctgaatgcctg
gcgcgtctgctcgatcaacggtctcgcaaccgaagccagggccctgcggtgccgtcgctg
gagctcgaatacgatctcgccggcgaagccatctccctgcaggtgggtgttgtcgaaacc
gacggtcttcttgccgtcacgctgaccgatgtgcgtgagatccgcaatcgcgaggtgctg
ttccgatcgctgttcgacgacaacccggtgccgatgtatgtgcgccatctcgcaaccggt
gtctttctcaacgtgaatgccgccgcacttcacctctacgggcatgatcgagccgcgttc
cttgccctggatattcgcaatctcgagccgaattccgccgcgcgcgttggttcctcgggc
gagcgcttcgcgcgccatcgcaccgcatccggagccgagctggacgtcatcgaatacaca
cgcgcgataacggttggcggacaaccggcgacgctgtcgacaatcgtcgacgtgacggaa
cgcaagcgggcggaagagcgcatttccttcctcgctcatcacgatccgctgaccggcgtc
ggcaaccgcaccactttttcgcaggaaatcgaggaagccgtggcgacggcggtcgccggc
caccagccattcgcgctggtcctgatcgatctcgacgatttcaaggcggtcaacgatacg
ctgggtcatgcggcaggcgactccctgctgatcgagacggcggacaggatccgccggctg
ctacgccgtactgatctcgtcgcccgtcttggcggtgacgaattcgcagtgctgttgcgc
ggtgccctgagccgggacgacgtccagctgctggccgggcggatcatccaggcgatcgcc
cagccgcacggctacgaggggcacaagctctccattggcgccagcctcggcgccgccatc
gcgcccgtcgacgcacgcgaggccggcacgctgctcaaatgcgccgacctcgcgctctat
cgttcgaagcgcgagggcaaggggacgttccatttcttcgaacctgagatggatgccgaa
atgcgggagcgccgcgaactggaactggaactgcgcgccgcggatttcgaccgcgaactg
gagttgcactatcagccgatcatctcgctgcgcagcggtggcctgcgtggcttcgaagcg
ctggtacgctggcgcaatccgagacgcggcatggtctcgccggcagaattcattcccctg
gctgaagagacaggcatgatcgacgccatcggccgctgggtgctggaggaagcctgccgg
cgtgcggccgcctggccacaggatctgatcatcgctgtcaatgcttcggcggtgcagttc
cgccagggccgcttcgcagagacagtcacccaggcgcttgcggcatccggcctcgatcct
tctcgcctggagatcgagatcaccgaatccgttctgcttgccgacacgggggccaatctt
gccctgctggagcggttgaaggatgtcggcgtgcgtgtcgcgctcgacgatttcggtacc
ggctattccagcatgagctatctcagacgcttcccgttcagccggctgaagatcgatcgc
tcctttatccgcgacatcggttccagtcgcgaatccatggcgatcgtgagagcgatcatc
ggtctgagcgccaatctcggcatcgacaccaccgcggaaggtgtcgagacgggtgcgcag
cttgaactgttgcggcaggaacgttgcggcgaaatccagggcttcctgttcagccccccg
gtagacagcgtcggcgccttgcgcatcatcgacagctatcgcagcgacgagagcaaggtc
gcctag
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