Mesorhizobium sp. Pch-S: C1M53_15960
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Entry
C1M53_15960 CDS
T05918
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
C1M53_15960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesp03400
]
C1M53_15960
DNA repair and recombination proteins [BR:
mesp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
C1M53_15960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Type_ISP_C
Motif
Other DBs
NCBI-ProteinID:
QAZ47249
UniProt:
A0A4P6HVR1
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All DBs
Position
complement(3381658..3382464)
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AA seq
268 aa
AA seq
DB search
MARQAFWKGYLKLSLVTCPVAMTPVVSSSEQIRFHTINRKSGRRVRSQYFDAETGKAVAE
DDEAKGYEVEEGKLIVFTDKELEAVALESTRTIDIETFVPVESIDWIWYDRPYLLVPDDK
VGAEAFAVIREAMKSTSMAGIARLVIANRERAVLLRSRDKGIFVWTLRYGDEVRDAADYF
GEIDSGKIGEKTLKSMRRAIAKETAAWNPKFSRDQLQDRLSKLIKKRAADAKKSAKAHKT
SKPGTASNVISITDALRASLAKEKQKAR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgtcaggctttctggaagggttacctcaaactgtccctcgtgacctgccccgtc
gcgatgacgccggtggtctccagcagtgagcagatccgttttcacacgatcaatcgcaag
agcggccgtcgcgtcagaagccagtatttcgacgcggaaaccggcaaagcggttgccgag
gacgatgaagccaagggctatgaggtcgaggaaggaaaactgattgtcttcacggacaag
gagctggaggccgtcgcccttgaaagcacccggaccatcgacatcgagaccttcgttccc
gtcgagtcgatcgactggatctggtacgaccggccctacctgctcgtgccagatgacaag
gttggcgcggaggccttcgcggtgatccgcgaggccatgaagtcgaccagcatggcaggc
atagcaagacttgtgatcgccaatcgcgaacgcgcggtcctgttacgctcacgcgacaaa
ggcattttcgtttggaccctgcgctatggcgacgaagtccgcgacgcggcggattatttt
ggcgaaatcgacagcggaaagatcggcgagaaaacgctgaagtcgatgcgcagggccatt
gcgaaagagaccgctgcctggaacccgaaattttcccgcgaccagttgcaggaccgcttg
agcaagctcatcaagaagcgcgcggccgacgcgaagaaatcggcgaaggcacacaagacc
tccaaaccggggacggccagcaacgtcatttccataaccgacgccctgcgggccagtctt
gccaaggaaaaacagaaagcgcggtga
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