Mesorhizobium sp. Pch-S: C1M53_16575
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Entry
C1M53_16575 CDS
T05918
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mesp
Mesorhizobium sp. Pch-S
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesp03016
]
C1M53_16575
Enzymes [BR:
mesp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
C1M53_16575
Transfer RNA biogenesis [BR:
mesp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
C1M53_16575
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Paralog
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GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
QAZ44310
UniProt:
A0A4P6HAR4
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All DBs
Position
3531583..3532230
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AA seq
215 aa
AA seq
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MFLFCSNRDVSAPRSGRDMSQGVFDFGQSEGPLRPKKPERLILMVLLETPVGSQVLEIAT
GIQTANRLQAKLRPLKHLHISLQHIRDDNRLREKYVFAAKCAANSVSVDAFDVCFDRIVT
FPGGRPDRRATVLLGGSTPLMDLQRKLGAALVSNGLRGTLSFNPHITLFYSSRSVVPQQI
DPLRFTVRTFSLVHSERGLTKYNVLESWLMPAKWH
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgttcttgttttgttctaatcgggacgtttcggccccgcgaagtgggcgagacatgtcc
caaggtgttttcgatttcggtcagtcagaaggtccgctccggcccaagaaaccggagcgg
ctgatcttgatggtgctgcttgaaacgccggtcggcagtcaggtgctggagattgccacc
gggatacagacggcgaacaggctccaggcgaaattgcgtccgctgaagcacctgcacatc
tcgctccagcacatcagggacgacaaccgtttgcgcgagaaatacgtatttgctgccaaa
tgtgccgcaaattccgtcagcgtcgatgcgtttgatgtctgtttcgatcgtatcgtcacg
tttcccggtggtcgaccggacaggcgagcaacggtgcttctgggcggaagcacgccgctg
atggatctccagaggaagcttggtgctgctctcgtctccaatgggttgcgtgggacgctg
agcttcaacccgcatatcacgcttttctacagttctcggtcggttgtcccgcagcagatc
gatccgttgcgtttcaccgtccgaacgttctcgcttgtccacagcgagcgaggactgaca
aaatacaacgttcttgaatcctggctgatgccggcgaagtggcactaa
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