KEGG   Mesorhizobium sp. Pch-S: C1M53_21365
Entry
C1M53_21365       CDS       T05918                                 
Symbol
clpV
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
mesp  Mesorhizobium sp. Pch-S
Pathway
mesp03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mesp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C1M53_21365 (clpV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mesp02044]
    C1M53_21365 (clpV)
Secretion system [BR:mesp02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C1M53_21365 (clpV)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_25 Clp_N NBD_SMAX1 AAA_7 nSTAND3 Sigma54_activat ATPase_2 NACHT TniB AAA_14 Zeta_toxin AAA_24 AAA_18 AAA_33 SLFN-g3_helicase Hpr_kinase_C Rad17
Other DBs
NCBI-ProteinID: QAZ45101
LinkDB
Position
4540951..4543767
AA seq 938 aa
MEQRRSSQSFKRKELVAKLNSLCQRAFKAAADATKLRGNPYVELVHFIEQLVLSERSDVQ
MIVADAGVDPSRLTADMTRAVDKLPYGATSIEEFSDHIFHAIQEGWNLATLEFGVEEVRS
AHILLACLKTPVLEGLLAKISTEFDKIDADGVISRFAEVTEGSLEAGSPAVAAIAETPVR
RGLGADSALAKYATDLTQRARDSKIDPVVGRDPEIRQIVDILMRRRQNNPILTGEAGVGK
TAVVEGFALRIAQGDVPPSLQNVSVRMLDVGLMQAGASVKGEFEKRLKAVIDEVQASETP
IILFIDEAHTLIGAGGAAGTGDAANLLKPALARGELRTIAATTWAEYKQHIEKDPALTRR
FQVVKIDEPAEAVAVLMLRGVAGVLEFHHKVQILDEAIEAAVSLSHRYIPARQLPDKAVS
LLDTACARVAVSQHATPAEVEDILRRRQALEVERGIIGREAAIGIDVTDRLAKVEAGLVE
TETTLAAAQARWDREKLLVSEILDLRARLRGEGLPLDAATGEETAAEPESAEAMAAEEKA
TKSKDTKAERTRKSKVGNAGAETKGVETENGGSRPEAAADLARLRALMAELVTAQGETPL
ILPSVDRNAVAAVVQDWTGIPTGRMLSSQTEKALKLAPTLSARVVGQDHAMEMIARRVQT
SRAGLGAPEKPVGVFLLCGPSGVGKTETALALAETLYGGEQNLISINMSEFQEAHTVSTL
KGAPPGYVGYGKGGLLTEAVRRKPYSVILLDEVEKAHPDVHEIFFQVFDKGMMDDSEGRR
IDFKNTLILLTSNVGSEVIMDRTKNGTVRTGIEDLDTALRAPLLKVFPAAFLGRVVTIPY
YPLSDSMIEAIARHQFNKIAKRLRATNDAELVIGDGVMDLVKARCTEIESGGRMIDAILT
NTLLPELSRGVLSRSLDGEKMTKVIVGASAEGFTYAFE
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggaacagcgccggtcttcacagagcttcaaacgcaaggagctcgtcgccaagctaaac
tctctctgtcagcgggcgttcaaggcggccgcagatgccaccaagctgcgtggcaatcct
tatgtcgagcttgtccacttcatcgagcagctggtgctttccgagcgctcggatgttcag
atgattgtcgccgacgccggggtggacccgagccgcctgaccgccgacatgacccgtgcc
gtcgacaagctgccctatggtgcgacctccatcgaggaattctccgaccatatctttcac
gcgatccaggaaggctggaacctggcgacgctggagttcggcgtggaagaagtgcgcagc
gcccatatcctgcttgcctgcctgaagacgccggtgctcgaaggcctgttggcgaagatc
agcacggagttcgacaagatcgacgccgacggagtcatttcccgctttgcggaggtcaca
gaaggctctcttgaagctggttcacctgccgttgccgcaattgccgaaacaccggtgaga
cgcggtttgggtgcggattccgcgctggcaaaatacgcgaccgatctcacccagcgcgcc
cgcgacagcaagatcgatccggtcgtgggtcgcgatccggaaatccggcagatcgtcgac
atcctgatgcggcgccggcaaaacaatccgatcctgaccggcgaggcgggcgtcggcaaa
acggctgtggtcgagggttttgccctgcgcattgcccagggcgacgtgccgccgtcgctg
cagaacgtcagcgtccgcatgctcgatgtcgggctcatgcaggccggtgccagtgtgaag
ggggagttcgaaaagcggttgaaggcggttatcgacgaggtacaggcctccgaaacgcca
atcatcctgttcatcgacgaggctcatacgctgatcggtgccggtggcgcggcgggcacc
ggcgatgcggccaatctcctgaagcccgcgctggcaagaggtgagcttcgtaccatcgcc
gccaccacctgggccgaatacaagcagcacatcgaaaaggacccggcgctgacacgccgc
ttccaggtcgtcaagatcgacgagccggcggaagccgtggccgtgctgatgctgcgcggc
gttgccggggtgttggagtttcaccacaaggtgcagatactggatgaggcgatcgaggct
gcggtctcgctctcacatcgttatatcccggccaggcaactgccggacaaggcggtcagc
cttctcgacactgcttgcgcccgcgtggccgtctcgcagcatgcgacgcctgccgaagtc
gaggacattctgcgccggcgccaggcgttggaggtcgagcgaggcatcatcggtcgcgaa
gccgcaatcggcatcgacgtcacggaccgactggccaaggtcgaggccgggttggtggag
accgagaccacccttgctgctgcccaggcgcgctgggatcgcgaaaagctgctggtgagc
gagattctcgacctgcgcgccaggctgcgcggcgagggtttgcccctggatgcggccacg
ggcgaggaaacggcggcagaaccggagagcgccgaagcgatggcggctgaggaaaaagcc
accaaaagcaaggacaccaaggccgagagaaccaggaaatccaaggtgggaaacgccggt
gccgaaacaaaaggcgtcgagacggaaaatggaggttcacggccggaagcggcagctgac
ctcgcacgattgcgcgccttgatggcggagctcgtcacagcgcagggcgaaacgcccctg
atcttgccgtcggtcgaccgcaatgccgtcgcggcggtggttcaggactggaccggcatt
ccgacgggccggatgctgtccagccagaccgagaaagccctgaagctcgctcccaccttg
tcggcgcgcgtggtcggtcaggatcacgcgatggaaatgatcgccaggcgcgtgcagacc
agccgcgccggcctcggcgcgccggaaaagccggtaggggttttcctgctttgtggtccc
tccggtgttggcaagaccgaaaccgcgctggcattggcggagaccctttatggcggcgag
cagaacctgatctcgatcaacatgtcggaattccaggaagcgcatacagtctcgacgttg
aaaggggcgccgcccggctatgtcggttacggcaagggcggccttctgaccgaggcggtg
cgcagaaagccctactcggtgatcctcctcgacgaggtcgagaaggcgcatccggatgtg
cacgagatcttcttccaggtcttcgacaaaggcatgatggacgacagcgaggggcgtcgc
atcgacttcaagaacacgctgatcctgcttacgtcgaatgtcggctccgaggtcatcatg
gatcgcacgaagaacgggaccgtgcgcaccggcatcgaagatctcgatacggcgctgcgt
gcgccgctgctgaaggtgtttccggcggcgttcctcggtcgcgtggtgacgattccttac
tatccgctttcggattcgatgatcgaggcgatcgcacggcatcagttcaacaagatcgca
aagcgcctgagagccaccaacgacgccgagctggtgataggcgatggcgtcatggatctg
gtcaaggcgcgctgcaccgagatcgaatccggtggccgcatgatcgatgccatactgacc
aacacgctgctgccggagttgagccgcggcgtactcagccgctcgctcgacggagaaaag
atgacgaaggtcatcgtgggcgcctcggccgaggggttcacctacgcgttcgaataa

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