Mesorhizobium sp. Pch-S: C1M53_22610
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Entry
C1M53_22610 CDS
T05918
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp03420
Nucleotide excision repair
mesp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1M53_22610
03430 Mismatch repair
C1M53_22610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesp03400
]
C1M53_22610
Enzymes [BR:
mesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1M53_22610
DNA repair and recombination proteins [BR:
mesp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1M53_22610
MMR (mismatch excision repair)
Other MMR factors
C1M53_22610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
DUF3638
Motif
Other DBs
NCBI-ProteinID:
QAZ45310
UniProt:
A0A4P6HD84
LinkDB
All DBs
Position
complement(4818297..4821002)
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AA seq
901 aa
AA seq
DB search
MAGDHDMPFFDEDDAPRFDAARASSSQAAPSGIVARAMAARQGHNNPPEYLKGLNPEQRQ
AVETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAFPSQILAVTFTNKAAREMKHRIGV
LVGEAVEGMPWLGTFHSIGVKLLRRHAELAGLRSDFTILDTDDVTRLIKQLIQAEGLDDK
RWAPRTFAQMVDTWKNKGLAPDEIPEGDARAFANGRGRELYRAYQERLTTLNACDFGDLL
LHPIRIFRKHHDVLAEYHRKFKYILVDEYQDTNTAQYMWLRLLAQRPKQSSAGSTTEGRE
PDWATEPLRGPRGAPAPSGAEQRASENKVNICCVGDDDQSIYGWRGAEVDNILRFEKDFP
GATVIRLERNYRSTAHILGAAAHLIAHNEGRLGKTLFTDRPDPEDPRVNVHAAWDSDEEA
RAVGEAIEAYQRGRHKLNDMAILVRASFQMRSFEDRFIEIGLNYRVIGGPRFYERQEIRD
AMAFLRVVANDGDDLAFERIVNVPKRGLGDATIRQIHDTARALGVPMLEASARLAESDEL
KPKPRAALREVAANFTRWRSLIDSTPHTELAEMILEESGYTDMWKNDRSAEAPGRLENLK
ELIRSMEEYESLRAFLEHVALVMDAEQNEGLDAVSIMTLHSAKGLEFETVFLPGWEEGLF
PHQRALDEGGRSGLEEERRLAYVGVTRAKKNLHIWFVSNRRIHGLWQSTIPSRFLDELPE
AHVEVQEGSGSSYGGYGNPYGGGAFASGRGGFSAGRQNPYGASRFDSIGSPSGGRAARGD
QGGSFSNSYATPGWQRAQQNRTEATDRNWGTRSGHQVERIGYGEVDSGYGAGRTSVKGRT
IEGELVAKSVADAPSAFKVGDRVFHQKFGNGNIAAIDGNKLTIDFDRAGQKKVLDGFVTV
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgatcacgacatgcccttcttcgacgaggacgacgctccgcgtttcgacgcc
gcgcgtgcatcgtcctcacaggcagccccgtccggcatcgtggctcgcgccatggcggcg
cgtcagggccacaacaatccacctgaatatctgaagggtctcaatcccgaacagcggcag
gcggtggaaaccaccgaaggcccggtgctggtgctggcgggcgcgggcaccggtaagacg
cgcgtgctcaccacccgcatcgcccatatcctggccactggccgcgccttccccagccag
atcctcgccgtcaccttcaccaacaaggcggcgcgcgagatgaagcaccgcatcggcgtg
cttgtcggcgaggcggtcgagggcatgccatggctgggcaccttccactccatcggcgtc
aagctgttgcgccgccatgccgaactggccggcctgcgctccgatttcaccatcctcgac
accgacgacgtcacccgcctgatcaagcagttgatccaggccgaggggctggacgacaag
cgttgggcgccgcggaccttcgcgcagatggtcgatacctggaagaacaagggccttgcc
cccgacgagattccggaaggggatgcccgcgccttcgccaatggccgcggccgcgaactc
taccgtgcctaccaagaacggcttaccacgctgaacgcctgcgatttcggcgacctgctg
ctccaccccatccgcattttccgcaagcatcacgacgtgctggccgaataccatcgcaag
ttcaaatacatactcgtcgacgaataccaggacaccaacaccgcgcaatatatgtggctg
cggctcctggcccagcgaccaaaacaatccagcgcaggctccacgaccgaaggtcgcgag
cccgactgggcgaccgagccgttgcgaggcccccgcggagcgcccgcgccttcaggcgcg
gaacagcgcgcgagcgaaaacaaggtcaacatctgctgcgtcggcgacgacgaccagtcg
atctatggctggcgcggtgcggaggtggacaacatcctgcgcttcgagaaggactttccg
ggcgccaccgtcatccgcctggaacgcaactaccgctccaccgcccatatcctcggcgcg
gctgcccatctcatcgcccacaacgagggtcgcctcggcaagacgctgttcaccgatcgc
ccggacccggaagaccccagggtcaacgtgcacgccgcctgggattcggacgaggaagcg
cgtgccgtcggcgaagccatcgaggcctatcagcgcggccgtcacaagctgaacgacatg
gcgatcctcgtgcgcgcctccttccagatgcgctccttcgaggaccgtttcatcgagatc
gggctcaattaccgggttatcggcggtccgcgcttctacgagcgccaggaaatccgcgac
gccatggctttcctgcgcgtcgttgccaatgacggtgacgatctcgctttcgagcgcatc
gtcaatgtgccgaaacgcgggctgggcgacgccaccatccgccagatccacgacaccgcc
cgtgcgcttggcgtgccgatgctggaagcatcggccagactggccgaaagtgacgagctg
aagcccaagccgcgcgcggcattgcgggaagttgccgccaacttcacacgctggcgaagc
ctgatcgattccacgccgcacaccgaactcgccgagatgatcctcgaggagagcggctac
accgacatgtggaagaacgaccgctcagccgaagcgccggggcggctggagaacctcaag
gagctgatccgctccatggaggaatatgaatcgctgcgcgccttcctcgaacatgtcgcg
ctggtgatggacgccgagcagaacgagggtctcgacgccgtttccatcatgacgctgcat
tcagccaagggcctggaattcgagaccgttttcctgcctggctgggaggaaggtctgttc
ccccatcagcgtgcgctggacgaaggcggccgttcggggctggaggaagagcggcggctg
gcctatgtcggcgtcacccgcgccaagaagaacctgcacatctggttcgtctccaaccgc
cgcatccatgggctgtggcaatcgacgattccctcgcggttccttgatgaattgccggaa
gcgcatgtcgaggtgcaggaaggcagtggctctagttacggcggctatggcaatccttat
ggcggcggtgccttcgcttcaggccgaggcggcttttcggccggtcgccagaacccgtac
ggcgcctcccgcttcgacagcatcggctcgccttcgggcggccgagcggcgcgcggcgat
cagggcggctccttctccaacagctacgccaccccaggctggcagcgcgcgcaacagaac
cgcaccgaagcgaccgaccgcaactggggcacgcgcagcggccatcaggtcgaacgcatc
ggttatggcgaagtcgattccggctatggtgccggccgtacctcggtgaaaggccgcacc
atcgaaggcgaactggtggcaaagtcagtggccgacgcgccgtcagccttcaaggttggc
gaccgcgtcttccaccagaagttcggcaacggcaacatcgcggcgatcgacggcaacaag
ctgaccatcgatttcgaccgcgccgggcaaaagaaagtgctggacgggttcgtgacagtg
gtttga
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