Mesorhizobium sp. Pch-S: C1M53_25610
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Entry
C1M53_25610 CDS
T05918
Name
(GenBank) RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
mesp
Mesorhizobium sp. Pch-S
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesp03009
]
C1M53_25610
Enzymes [BR:
mesp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
C1M53_25610
Ribosome biogenesis [BR:
mesp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C1M53_25610
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
EccE
Motif
Other DBs
NCBI-ProteinID:
QAZ45789
LinkDB
All DBs
Position
5464645..5466732
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AA seq
695 aa
AA seq
DB search
MDDKDNKPPRSRGPRSDGPRSREPGKGGKPGFGKKPFAKRFDGDKATGERPRGDFKPGGG
KPWQKREDGGKRPFEKGARGEGKPFVKRDGPRKPYAPREDHAAEGERPRRDFSDRPRSAR
SEGDFRQDRKPYEKREGGGSYGKRPFEQGSRGEGKPFVKRDGPRKPYASREGHSADAERP
KRDFGGDRPRGPRPEGGFRSDRKPYEQREGSGNQRPGRFERGERKFDGERAERRFDKEPG
ERRFERPKREFDGERKPFQKRDGVASKRPFDKGPRREAAARAPASSEVAETGERIAKRLA
RAGIASRRDAEELIAAGRVKVNGKVLTSPAVNVATDDVIHLDGTEIPPIERTRLFLFHKP
AGVVTTNRDPEGRKTVFDVLPAELPRLMTIGRLDINTEGLLLLTNDGGLSRVLELPATGW
LRRYRVRVHGKVEEQALADLRDGIAVDGVFYGAIEASLERTQGTNAWLTIGLREGKNREV
KNILGALGLEVTRLIRVSYGPFQLGELPEGHVQEIKGRTLREQLGETLIEEAGANFDADI
TMPFSNKPVRRTEPRPEEKPRPRPLRDGDHRPAGEGGLIKARKRREGSRDEALGKLSTKP
DRGGFGDRGGFAKGSGGKGFGERGPKKGEREQRPIDPPGQRRANVWMAPGARPQGAKAER
SEKPGSGKAGPRGRSFDDKGGAPRGKGPGKGPRSR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaagacaacaagccgccgcgttcgcgcggtcccagatcagacggtccacgc
agccgcgagcccggcaaaggcggaaagcctggctttggcaagaagccgttcgccaagcgt
ttcgatggcgacaaggcaacaggcgagcggccgcgcggcgacttcaagccgggtggcggc
aagccatggcagaagcgtgaggatggcggcaagcgcccctttgagaagggtgcacgcggc
gaaggcaagcctttcgtcaagcgcgacggcccacgcaaaccctatgcgccgcgcgaagac
catgcggcagaaggcgagcggccgaggcgcgatttttcggatcgtcctcgcagcgcgcgc
tcggaaggtgacttccggcaggaccgcaagccatacgagaagcgcgaaggcggtggctcc
tacggcaagcggcctttcgagcagggctctcgcggcgaaggcaagcctttcgtcaagcgc
gacggtccgcgcaaaccttatgcatcgcgcgagggtcattcagcggatgccgagcgccca
aagcgcgactttggcggcgaccggccgcggggcccgcggcccgaagggggctttcgttcg
gatcgcaagccttatgaacaacgcgaaggttcaggcaatcaacgtcctggccgcttcgaa
cgcggggagcgcaaattcgacggcgagcgcgcagaacgccgttttgacaaggaacccgga
gaacgccgtttcgagcgcccgaagcgcgagttcgacggcgaacgcaagccgttccagaaa
cgtgacggggttgcgtccaagcggcccttcgacaagggaccacgccgcgaagctgcggcg
cgcgctcctgcttcgagcgaagtggccgagaccggcgagcgcatcgccaagcggctggcg
cgcgccggcattgcttcgcggcgcgacgccgaggagctgatcgcagccggccgcgtcaag
gtcaacggcaaggtgctgacttcaccagccgtcaacgtggcaacggacgatgtcatccat
ctcgacggtaccgaaattccgccgatcgagcgcacccggctgttcctgttccacaagccg
gctggcgtggtcaccaccaatcgtgacccggaaggtcgcaagaccgtctttgacgtgctg
ccagccgaactgccgcgattgatgaccatcggccgcctcgacatcaacaccgaaggcctg
ctgctgcttaccaatgacggtggcttgtcgcgagtgctggaattgcctgccacaggttgg
ctccgtcgctaccgcgtgcgcgtacacggcaaggtcgaggagcaggcgctggccgatctc
agggacggcatcgcagtcgacggcgttttctacggcgcgatcgaggcttccctggagcgc
acgcaaggcaccaacgcctggctgaccatcggcttgcgcgaaggcaagaatcgtgaggtc
aagaacatcctcggcgcgctcggcctcgaagtgacacggctgatccgcgtttcctatggt
ccgttccagctgggtgaattgccggaaggccatgtgcaggagatcaagggccgcaccctg
cgcgagcagctcggcgaaaccttgatcgaggaagccggcgccaatttcgacgccgatatc
accatgcctttctcgaacaagccggtgcgccgcaccgagccgcgccctgaagagaagcct
cggccccggccgctgcgcgatggcgaccatcgtccggccggtgagggaggcttgatcaag
gcgcgcaaacggcgcgaaggcagtcgggacgaggcgctcggcaagctgtcgaccaagcct
gatcgtggaggttttggcgatcgcggcggtttcgccaagggcagcggcggcaaaggcttc
ggcgagcgcggcccgaagaaaggcgagcgagagcagaggccaatcgatccacccggccag
cgccgtgccaatgtctggatggcgcctggcgccagaccgcagggcgccaaggcggagcgg
tcggaaaagcccggttctggcaaagctggtccacgcggccgttcctttgacgacaagggc
ggtgctcctcgcggcaagggaccgggcaaaggccctcggtcgcgctga
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