Mesorhizobium sp. Pch-S: C1M53_25940
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Entry
C1M53_25940 CDS
T05918
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mesp
Mesorhizobium sp. Pch-S
Pathway
mesp03030
DNA replication
mesp03430
Mismatch repair
mesp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1M53_25940
03430 Mismatch repair
C1M53_25940
03440 Homologous recombination
C1M53_25940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesp03032
]
C1M53_25940
03400 DNA repair and recombination proteins [BR:
mesp03400
]
C1M53_25940
Enzymes [BR:
mesp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1M53_25940
DNA replication proteins [BR:
mesp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1M53_25940
DNA repair and recombination proteins [BR:
mesp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1M53_25940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QAZ45842
UniProt:
A0A4V0YPT2
LinkDB
All DBs
Position
5522509..5525988
Genome browser
AA seq
1159 aa
AA seq
DB search
MAPKREEVPARPFIHLRVHSAYSLLEGALQLGPIVGHAIKDQAPAIAVTDTNNLFGALEF
AQKAVKDGIQPIMGSQVDLAFCGESNDGQRDRRKQGPDLRPVVFIAANEIGYANLVRLIS
RAYLETPSGEPVHVTTDMVAEVAEGVICLTGGPRGPIGAALRDDRKDLAEARLLTLKALF
GSRLYVELERMAGYDRGIEHATVELAYRHELPLVATNEAFFSSREDFEAHDALIAIAEGS
VIAADERRRLTPDNYLKSQADMARLFADLPEAIDNTIEIAQRCSYYPKNRKPILPRFAGA
DVADAEAAEMAEAEELALQARDGLARRFAERGLHGGFTEEQYRERLEFEIGIIQRMKFPG
YFLIVSDFIKWAKMQDIPVGPGRGSGAGSLVAYALTITDVDPLQFSLLFERFLNPDRVSM
PDFDIDFCQDRREEVIRYVQAKYGRDQVGQIITFGTLQARAVLRDVGRVLQMPYGQVDRL
CKMVPQNPANPVKLADAIANEPRFAEEAEKEPIVNTLLEMAQKLEGLYRHASTHAAGIVI
GDRPLSELVPMYRDPRSDMPVTQFNMKKVEDAGLVKFDFLGLKTLTVLEKAVKLIRRRGI
DIDLATIPIDDQQTYAMLSRGEVVGVFQVESAGMRKALIGMRPDRIEDIIALVALYRPGP
MENIPTYNARKHGEEEIASIHPKIDHLVKETQGVIVYQEQVMQIAQELAGYTLGQADLLR
RAMGKKIRAEMDKQRDIFVAGAVERGVAKPQADFIFDLLAKFADYGFNKSHAAAYAIVSY
QTAYLKAHYPVEFLAASMTLDMSNTDKLADFRQDAMRLGIEVVAPSVLTSFRDFEVGENK
IFYSLAALKGVGDAAVEHIVEKRKDGPFKNLADFCERIDPKIVGKRVFESLIMAGALDCF
GHDRAQMIAGVERMMGLAALAQQNATSGQADIFGASLGAQSQALNLPVTEPWLAADRLHR
EFQVVGFYLSAHPLDEYKAALQKMRVQNWAEFSAAVKRGASAGRLAGTVTAKQERKTRTG
NKMGVVNFSDMTGQYEAVMFSETLAQYRDMLEAGKSVVITVAAEDRPEGVNLRIQTVQSL
EDEASRIQKALRIFLRDASPLNTLAGQLSVKGEGQVSFVLIKDGGQGEIEIELPTRYRIS
PQVASAMRAVPGVIEVELV
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagagggaagaagtccccgcgcgtccattcattcatctgcgggttcattcg
gcctattcattgctggaaggcgcgctgcagcttggaccgatcgttgggcacgccatcaag
gatcaggctccggccatcgcggtcaccgataccaacaacctgttcggcgcgctggaattc
gcccagaaggcggtcaaggacggtattcagccgatcatgggcagccaggtcgacctggca
ttttgcggcgagagcaacgacggacaacgcgaccgccgcaagcaggggcctgacctgcgc
cccgtcgtgttcattgctgcaaatgaaatcggctacgccaacctggtccgactgatcagc
cgggcctatctggagacaccatccggcgagccggtgcacgtcaccaccgatatggtggcg
gaagtcgccgagggcgtcatctgtctgaccggcggtccacgtgggccgatcggtgcagcc
ttgcgcgacgaccgcaaggatctggccgaggcacgtctgctgaccctcaaggcgctgttc
ggtagtcggctctatgtcgagctggaacgcatggccggctatgatcgtggcatcgagcac
gcaaccgtggaactggcctaccgtcacgagttgccgttggtagcgaccaacgaggcgttt
ttctcctcacgcgaggatttcgaagcgcatgacgcgttgatcgccatcgccgagggttcg
gtgatcgcggcggacgagcgccggcggctgacgccagacaattatctgaagagccaggcc
gacatggcgcggctgttcgccgacctgccggaagcgatcgacaacacgatcgagatcgcg
cagcgctgctcctactacccgaagaaccgcaagcccatcctgccacgtttcgccggcgcc
gatgtggccgatgcagaagccgctgaaatggccgaggccgaggaactggctctgcaggcc
cgcgatggtctcgccaggcgtttcgccgagcgcggcctgcacggaggttttacggaggag
cagtatcgcgaacggctggagttcgagatcggtatcatccagcgcatgaagttccccggc
tatttcctgatcgtttcggacttcatcaaatgggcgaagatgcaggatattcccgtcggg
ccgggccgcggttccggcgcaggttcgctggtcgcctacgcgctcaccatcaccgacgtc
gatccgctgcaattctcgctgctgttcgagcgcttcctcaatcccgaccgtgtctcgatg
ccggacttcgacatcgacttctgccaggatcgccgcgaagaagtgatccgctatgtgcag
gccaaatacggccgcgaccaggtcggtcagatcatcaccttcggaacactgcaggcccgc
gcggtcctgcgcgacgtcggccgcgtgctgcagatgccctatggccaggtcgaccggctc
tgcaagatggtgccgcagaacccggccaacccggtgaagctggcggacgccatcgccaat
gagccccgctttgccgaagaggcggaaaaggagccgatcgtcaacacgctgctcgagatg
gcgcagaagctcgaagggctgtatcgccatgcttcgacgcacgccgccggcatcgtcatc
ggtgaccgtccgttgtcggaactggtgccgatgtaccgcgatccgcgctcggacatgccg
gtcacgcagttcaacatgaagaaggtcgaggacgccggactggtgaagttcgacttcctc
ggcctgaagacgctgacggtgctggaaaaggcggtgaagctgatccgccgccgcggcatc
gatatcgaccttgccaccatcccgatcgacgaccagcagacctatgccatgctgtcgcgc
ggcgaggtcgtcggcgtgttccaggttgaaagtgccggcatgcgcaaggcgctgatcggc
atgcgtcccgaccgcatcgaggacatcatcgcgcttgtggcgctctatcgccccggcccg
atggagaacatcccgacctacaatgcgcgcaagcatggcgaagaggaaatcgcgtcgatc
catcccaagatcgaccatctggtaaaggagacgcagggcgtcatcgtctatcaggaacag
gtgatgcagatcgcccaggagcttgccggctacacgctcggccaggccgacctgttgcgc
cgcgccatgggcaagaagatccgcgccgaaatggacaagcagcgcgatatcttcgttgcc
ggtgccgtcgagcgcggtgtcgccaagccgcaggccgatttcattttcgacctgctggca
aagttcgccgactatggcttcaacaaatcgcacgctgctgcctacgccatcgtctcctac
cagaccgcctatctcaaggcgcactatccggtggaattcctggcagcgtcgatgacgctc
gatatgtcgaacaccgacaagctcgccgatttccgccaggatgcgatgcggctgggtatc
gaggtggtggcgccttcggttctgaccagcttccgcgacttcgaagtgggcgagaacaag
attttctactctcttgccgcgttgaagggtgtcggcgacgccgcagtcgagcacatcgtt
gaaaagcgcaaggatgggcccttcaagaacctcgccgatttctgcgagcgcatcgatccc
aagatcgtcggcaagcgcgtcttcgaaagtcttatcatggccggcgcgctcgactgtttc
ggccacgatcgcgcgcagatgatcgccggcgtcgaacgcatgatggggttggcagcactt
gcgcagcagaacgccacttcggggcaggccgacatctttggcgcttcgctgggcgcgcaa
tcccaggcgctcaacctgccagtaaccgaaccgtggctggccgcggaccgcctgcaccgc
gaattccaggtggtcggcttctacttgtcggcgcatccgctggatgaatacaaggccgcg
ctgcagaagatgcgcgtgcagaactgggcggagttctccgctgccgtgaaacgcggcgcc
tccgcaggccggcttgccggaacggtcaccgccaagcaggagcgcaagacgcgtaccggc
aacaagatgggagtcgtcaatttctccgacatgaccggccaatatgaggctgtcatgttc
tcggaaacgctcgcgcaatatcgcgacatgctggaggccggcaaatccgtggtcatcacc
gtggctgcggaggacaggcctgaaggcgtgaatctgcgcattcagacggtgcagtcactg
gaggacgaggcgagccgcatccagaaggcactgcgcatcttcctgcgcgatgccagcccg
ctcaacacgctggccggccagctttctgtaaaaggcgagggccaagtctccttcgtactg
atcaaggatggcggacaaggcgaaatcgaaatcgaattgcccacccgttaccgcatctcg
cctcaggtcgcctcggccatgcgagccgtgcccggcgtcatcgaggtcgaactggtctag
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