KEGG   Mesorhizobium sp. Pch-S: C1M53_27845
Entry
C1M53_27845       CDS       T05918                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mesp  Mesorhizobium sp. Pch-S
Brite
KEGG Orthology (KO) [BR:mesp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mesp03016]
    C1M53_27845 (rnd)
Enzymes [BR:mesp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     C1M53_27845 (rnd)
Transfer RNA biogenesis [BR:mesp03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    C1M53_27845 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: QAZ47566
UniProt: A0A4P6HGN9
LinkDB
Position
5865170..5866327
AA seq 385 aa
MHLITTQDELDAVVRELAKSEFVTVDTEFIRETTFWPVLCLIQMAAPGVTALIDPLAPGL
DLKPFFDLMRNENVTKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQKVTGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIDVYKHLKDQLAREDRAHWLNE
EMEVLTSRETYDPHPEDAWKRLKMRLRKPQELAVVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDANALGRLRTTPKGWERSATATSLLDAVNTALARPKEEMPKLPKVFQPP
EGTSAASELLKVLLRIVAEKQGVAAKVLATSDDIDRIAAEGEEADVPALQGWRRAVFGDA
ALRLVRGEIGIKFEKRRIAVFDLKN
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcatctgataacaacccaagacgaactggatgcggttgttcgcgaactcgccaaatcc
gaattcgtcaccgtcgacaccgagttcatccgcgaaaccactttctggcccgtgctctgc
ctgatccagatggcggctcccggcgttaccgcgctgatcgatccgcttgcaccagggctg
gatctgaagccgttcttcgatctgatgcgcaacgagaacgtcaccaaggttttccacgcc
gcacgccaggacatcgaaatcatcgtccatctcggcgacctcgttccgcatccggttttc
gacacccaggttgccgccatggtctgcggcttcggtgacagcgtctcctatgaccagctg
gtgcagaaggtgaccggcgcccgcctcgacaagtcgtcgcgtttcaccgactggcggcac
cggccgctctccgacaagcagctcgactatgcgctggccgacgtcacccatctgatcgat
gtctacaagcatctgaaagaccagctggcccgcgaggatcgtgctcattggctgaacgag
gaaatggaggtgctcacctcccgcgagacatacgacccacatcccgaggatgcctggaag
cggctgaagatgcggttgcgcaaaccgcaggagctggcggtcgtgcaggctgtcgccgcc
tggcgtgagcgcgaggcccgggagcgcgacgtgccgcgcgggcgggtgctgaaagacgat
gcgatctatgaggtcgcacaacaggcgccacgcgatgccaacgcgctcggccggctgcgc
accacgccgaagggctgggagcgctctgcgacggcaacgtcactgctcgatgcggtcaac
acggcgctggcgcgtcccaaggaagagatgccgaaactgccgaaggtgtttcagccaccg
gagggcacaagtgctgcatcggaactgctgaaggtgctgctccgaatcgttgccgagaag
cagggcgttgccgccaaggtgctggcgacaagcgacgatatcgaccggatcgccgcggaa
ggcgaggaagccgacgtgccagccctgcaaggctggcgtcgcgccgtgttcggcgatgct
gcgctccggctcgtacgcggcgaaatcggcatcaagttcgagaagcgcaggatcgctgtc
ttcgacctgaaaaactga

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