Mesorhizobium sp. Pch-S: C1M53_27930
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Entry
C1M53_27930 CDS
T05918
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
mesp
Mesorhizobium sp. Pch-S
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
QAZ46188
UniProt:
A0A4P6HH10
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Position
complement(5884615..5887065)
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AA seq
816 aa
AA seq
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MANSTKLQSYRAKRNFAKTPEPTGIQELHDGNRFVVHKHHATADHYDLRLEIDGVLKSWA
VPRGPSLNPADKRLAVQTEDHPIDYIDFEGVIPAGEYGGGPMIVWDTGTWAPMDDIDTSL
EKGAFKFRLSGEKLRGGWMLARLKAKEDEDKVNWLLFKERDQAADAKVDILAKRPESVKS
GRRIEELVERPKPAATATAPKPAKAAGAVRGPMPARLEPQLATAVATPPSGKEWLHEIKF
DGYRTAAHIADGAVTFITRSGLDWSKRYGRLKTAFETLACASAIIDGEIVVTDDKGISRF
SALQDALAAGETHKLTFYAFDLLYLDGWDLSGVTLAKRKELLGQLLGGVTAKSALQLSDH
VTSDGEALYEHASELGLEGIVSKQASSVHVPGRSKSWTKVKARAVGDFVIAGYTVSEAAE
GLAALALAEWVDGELEYRGKCGSGFDAETLPMLLTRLQALQADAIRLDGMPREVIPVRPV
LTAHVHYANRTDDNALRHAVFKGLREAELSARTVAPRKRLISDADLAGIFVTNPTRRIFG
KTGPTKLDIAVYYAAVGDFMLPHILGRPVSLVRCPTVKPEDCFFQRHAFTGMPATMVSFE
TQNSDGEARSYIAVEDAKAYLALAQFGVVEFHTWGAHRQSLDKPDRAVFDLDPGDGIGWR
EVVEAAIHVRGELESFGLVPFVKTSGGKGIHVVVPVKKKLGWRQFHQACSEISSRIAATA
PETFTTTMGAENRRKRIFIDFHRNARSHTAAAPYTLRRRPHMPASTPLEWNDLESIDAAE
DLNYSSLPGLLAASGDPWVDIDDFARELPAPAKAKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattccaccaagctccagtcctaccgcgccaagcgcaatttcgccaagacacct
gaacccaccggcatccaggaactgcatgacggcaaccgcttcgtcgtgcacaagcaccac
gccacggcggaccactatgacctgcgcctggagatcgatggcgtgctgaagagctgggcc
gtgccgcgcgggccctcgctcaatcctgccgacaagcggctcgcggtccagaccgaagac
catccgatcgactatatcgacttcgaaggagtcattcccgcgggcgaatatggcggaggc
ccgatgatcgtgtgggataccggcacctgggcgccgatggatgacatcgacacgtcgctg
gagaaaggcgctttcaagttccggctgtccggcgaaaagctgaggggcggctggatgctg
gccagattgaaggcgaaggaggatgaggacaaggtcaactggctgctgttcaaggagcgt
gaccaggccgccgacgccaaggtcgacatcctcgccaaacgccctgaaagcgtgaagtcc
gggcgccgcatcgaagaactggtcgagaggccgaaaccggctgcgacagcgaccgcacca
aagccggcaaaagccgcaggcgctgtccgcggaccgatgccggcgcgccttgagccgcaa
ctggccacagcggtcgccactccgccctcaggcaaggagtggctgcatgagatcaagttt
gacggctaccggacggcggcgcatatcgcggatggtgccgtcaccttcataacccgcagc
ggcctcgactggtccaagcgttatggacggttgaagaccgcattcgaaactctcgcctgc
gccagcgcgatcatcgatggcgaaatcgtcgtcaccgacgacaagggcatcagccgtttt
tccgcgctgcaggacgcgctggcggctggcgaaacccacaagctaaccttctacgccttt
gatcttctgtatctcgacggctgggacctgtcgggcgttacgctcgccaaacgcaaggaa
ctgctcgggcagttgctgggcggcgtgaccgcaaagagcgctctgcagctcagcgatcac
gtcacgtccgatggtgaagcgttgtacgaacacgcatcggaactgggcctggaaggtatc
gtctccaaacaggcgtcgtcggtccatgtgcccggccgttccaagagctggaccaaggtc
aaggcgcgcgcggtcggtgatttcgtcattgccggctacaccgtctccgaagcggctgaa
ggtctggcagcgctcgcactcgccgaatgggtcgacggcgaactggaataccgcggcaaa
tgcggctcgggtttcgatgccgaaacgctgccgatgctgctgacgagactgcaggcattg
caggccgacgccatcaggctggacggcatgccgagggaagtcatacctgtccgaccggtg
ctgaccgcccatgtccactatgccaatcgtaccgacgacaacgcgctgcgccatgccgtg
ttcaagggtctgcgcgaggctgaactttcagctcgcaccgtcgcgccacgcaagcggctg
atttccgacgctgatctcgcagggatcttcgtcaccaatccgacgcggcggatcttcggc
aagaccgggccgaccaagctcgacatcgccgtctactatgctgctgtcggcgatttcatg
ctgccgcatatcctcggcaggccggtgtcgctggtgcgctgcccgacggtcaagccggag
gattgttttttccagcgccatgctttcactggcatgccggcgacgatggtatcgttcgag
acacagaattccgacggcgaggcgcgcagctacatcgccgttgaggatgccaaggcttat
ctggcgctggcgcagttcggcgtcgtcgaattccatacctggggtgcgcatcgccagagc
ctcgacaagcctgatcgcgctgtcttcgacctcgatcccggcgatggcattggctggcgc
gaggtggtcgaggccgccatccatgtccggggcgaattggagagcttcggtctggtgccc
ttcgtaaagacttccggcggcaagggcatccatgtcgtcgtgccggtgaagaagaaactc
ggctggcggcaattccaccaggcctgcagcgagatctcgtcccgcatcgctgccaccgcg
cccgaaaccttcaccaccaccatgggtgcggagaaccgccgcaagcgtattttcatcgac
tttcatcgcaatgcgcgcagccacacagcggctgcgccgtacacgctgcgcaggcgtccg
catatgccggcttcgacgccgctggaatggaatgatcttgaatccatcgacgctgccgag
gatttgaactattcttcgctcccaggccttttggccgcatctggtgatccttgggtggac
attgatgactttgcccgggaattgccggcgcctgcgaaggcgaagaagtag
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