Mesoflavibacter sp. HG96: C7H62_0650
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Entry
C7H62_0650 CDS
T06472
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mesq
Mesoflavibacter sp. HG96
Pathway
mesq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7H62_0650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesq03019
]
C7H62_0650
03016 Transfer RNA biogenesis [BR:
mesq03016
]
C7H62_0650
Enzymes [BR:
mesq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C7H62_0650
Messenger RNA biogenesis [BR:
mesq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C7H62_0650
Transfer RNA biogenesis [BR:
mesq03016
]
Prokaryotic type
tRNA degradation factors
C7H62_0650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
QIJ88459
LinkDB
All DBs
Position
699989..702238
Genome browser
AA seq
749 aa
AA seq
DB search
MIPQTYKEVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKAADVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQIMIQLMS
HDPEVMPDAMAGLAASAAIQLSDIPFEAPISEVRVGRINGEFIINPTLAQLAESDIDMMI
GASADSVMMVEGEMDEISEEEMTEAIKAAHEAIKVQCEAQTRLAEAFGKKETREYEAERA
DEDLAKKIHDMAYDKVYAVAKAGSSKQERGAAFAQIKEEIIATFSEEEIEDYGDLISKYY
SKAEKAAVRDLTLNEGLRLDGRKTTEIRPIWCEVDYLPSTHGSSIFSRGETQALATVTLG
TSREANQIDMPSFEGEERFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPE
DCPYTVRVVSEILESNGSSSMATVCAGTMALMDAGVQMKKPVSGIAMGLITDTESGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQARDGRLHILGKL
TETISEPNADVKGHAPKMVTRRIPNEFIGALIGPGGKNIQELQKETETTIVINEDPVTEE
GIVEILGVGSEGIDAVLARIDAMLFKPQVGSVYEVKVIKMLDFGAVVEYTEAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGVDARTKKDKVSRKALLPKPEGYKERAPRDNKG
GNRDNKGRDNRNRDNRRDDKKPRDNKKED
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgattccacaaacttacaaagaggtcatagaccttggtgacggtagagaaatctctatc
gaaaccggaaaattagcaaaacaggcacatggttctgttgttgtacaatctggtaaatgt
atgctattatgtacagtagtatctaactacaaagctgcagacgtagactttttaccatta
acagtagattaccgcgaaaaatttgctgctgctggacgttatccaggtggattcttcaaa
agagaagcaagaccaagcgacggtgaagtattaactatgcgtcttgtagaccgcgtgtta
cgtcctttatttccaaaagactatcacagcgaaacacaaatcatgatacaattaatgtct
catgacccagaagttatgccagatgctatggcaggattagctgcttctgctgcaatccag
ttgtcagacattccgtttgaagcgccaatttcagaagtaagagttggacgtattaatggc
gaatttatcatcaacccaacattagcacaattagcagaatctgatatcgatatgatgatt
ggtgcatctgcagactctgtaatgatggttgaaggtgaaatggatgaaatttctgaagaa
gaaatgacagaagctatcaaagctgctcacgaagcgattaaagtacagtgtgaagctcaa
actagattagccgaagcatttggtaaaaaagaaactagagagtacgaagcagaaagagca
gacgaagacttagctaaaaagatccatgatatggcatacgacaaagtatatgctgtagct
aaagcaggatcttctaaacaagaacgtggtgctgcatttgcccaaattaaagaagaaata
atcgcaactttttctgaagaagaaattgaagattatggagacttaatctctaaatactac
agcaaagcagaaaaagctgctgtacgtgatttaactttaaacgaaggtttacgtcttgat
ggtcgtaaaactaccgaaattagaccaatctggtgtgaagtagattatttaccatctaca
cacggatcttctattttctctcgtggtgaaacacaagcattggcaaccgtaactttagga
acaagtagagaagcaaaccaaatagatatgccatcttttgaaggtgaagagcgtttctat
ttacattataatttccctccattttcaacaggagaagcaagaccaataagaggtacttca
agacgtgaagttggacatggtaatttagcgcaacgtgcattaaaaggtatggtaccagaa
gactgtccttatactgtacgtgtagtttcagaaattttagaatctaacggttcttcttct
atggcaaccgtatgtgctggtactatggcattaatggatgcaggtgtacaaatgaaaaaa
cctgtttctggtattgcaatgggattaattaccgatacagaatctggtaaatacgctgta
ttatctgatattttaggagatgaagatcacttaggtgatatggactttaaagtaactggt
actgcagatggtattacagcttgtcaaatggacataaaagttaaaggattatcttacgag
attttagtaaatgcactaaaacaagctcgtgatggtcgtttacacatcttaggtaaatta
acagaaacaatttctgaacctaatgcagatgttaaaggtcacgctccaaaaatggtaaca
agacgtatacctaatgagtttattggagcacttattggtcctggcggaaagaatattcaa
gaattacaaaaagaaacagaaacaactatcgttattaacgaagatcctgttacagaagaa
ggtattgttgaaatcttaggtgttggatcagaaggaattgatgctgttttagcgcgtatc
gatgccatgttatttaagcctcaagttggaagtgtttacgaagttaaagtaattaaaatg
ttagattttggagctgttgtagaatacacagaagcaccaggaaacgaagttttattacat
gtaagcgaattagcttgggaacgcacagaaaatgtatctgatgttgtaaatatgggagat
gtatttgatgtaaagtactttggtgtagacgctagaactaaaaaagacaaagtatctcgt
aaagcacttttaccaaaacctgaaggttataaagaaagagctccaagagacaacaaaggt
ggaaatcgtgataacaaaggacgtgacaatcgcaatcgtgataaccgtcgtgacgataaa
aaaccaagagacaataaaaaggaagattaa
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