Mesoflavibacter sp. HG96: C7H62_1981
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Entry
C7H62_1981 CDS
T06472
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mesq
Mesoflavibacter sp. HG96
Pathway
mesq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7H62_1981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesq03019
]
C7H62_1981
03400 DNA repair and recombination proteins [BR:
mesq03400
]
C7H62_1981
Enzymes [BR:
mesq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7H62_1981
Messenger RNA biogenesis [BR:
mesq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7H62_1981
DNA repair and recombination proteins [BR:
mesq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7H62_1981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Motif
Other DBs
NCBI-ProteinID:
QIJ89790
UniProt:
A0A6G7RWE7
LinkDB
All DBs
Position
2207936..2210116
Genome browser
AA seq
726 aa
AA seq
DB search
MHAALKKYFGFSEFKGLQEQVIKSILDQNNTFVIMPTGGGKSLCYQLPALMQEGTAIVVS
PLIALMKNQVDAIRGVSNENGIAHVLNSSLNKTEVKQVKSDIKNGVTKLLYVAPESLTKD
EYVEFLRSVKISFMAVDEAHCISEWGHDFRPEYRNLRNIIKRIGENIPIIGLTATATPKV
QEDILKNLGMTDANTFKASFNRPNLYYEIRPKTKNVDSDIIRFIKQNDGKSGIVYCLSRK
RVEELAQVLQVNGIKAVPYHAGLDAKKRASHQDMFLMEDIDVVVATIAFGMGIDKPDVRF
VIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMSGKPVAEQEIGHALL
QEVVAFAETSISRRKFILHYFGEDFDNQTGEGGDMDDNMRHPKEKEEASKEVTTILDIVK
KTNAKYKSKELVNVIVGKSNALINSHKTDEQPFFGVGKNKEKSFWMALTRQMLVAGLLKK
DIETYGVIKLTPAGEAFLDQPTSFMMTKDHDFSQDPDADIITATKGGGAVVDEQLMKMLK
DLRKSNAKKLGVPPFVIFQDPSLEDMALKYPISVEELSNVHGVGEGKAKKYGKDFVKLIA
KYVEDNDIVRPDDMVVKSTGSNSGIKLYIIQNVDRKLPLTDIASAKGMEMPAFIKEMEAI
VYSGTKLNIDYWIDEILDEDQQEELHDYFMDTETDKIDVALDEFDGDYDDEELRLYRIKF
ISEVAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttgcatgcagcattaaaaaaatattttggatttagtgagtttaaaggcttacaagaacaa
gtaataaaaagtattttagatcaaaataacacctttgttattatgcctactggtggcggt
aaaagtttatgttaccaattaccagctttaatgcaagaaggaacagctattgtggtatca
cctttaatagctttaatgaaaaaccaagtagatgctataagaggtgtctctaacgaaaac
ggtattgctcatgtcttaaattcttctttaaataaaacagaagtaaaacaagtaaagtca
gatataaaaaatggtgttactaagctgctttatgtagctccagaatcgttaacaaaagat
gaatatgtcgaatttttacgttcggtaaaaatatcatttatggcggtagatgaagcccat
tgtattagtgaatggggacacgattttagaccagaataccgtaatttaagaaacataata
aaacgaattggagaaaatattccaataataggtttaacagctacagcaactcctaaagta
caagaagatattcttaaaaacttaggaatgacagatgctaatacctttaaggcctcgttt
aatagaccaaacttgtattatgaaataagaccaaaaacaaaaaatgtagactcagatata
attcgttttataaaacaaaacgatggtaagtctggaattgtttattgtttaagtcgtaaa
agagtagaagagttagcacaagtattacaagttaatggtataaaagctgtgccatatcat
gctgggttagatgctaaaaaaagagcatcacatcaagatatgtttttaatggaagacata
gatgtagttgtagcaaccatcgcatttggaatgggtattgacaaaccagacgtacgtttt
gtaatacatcatgatataccaaaaagtatagaaagttactatcaagaaactggtcgtgca
ggtcgtgatggaggcgaaggacattgtttagcttactattcttacaaagacatagaaaag
ttagaaaaatttatgtctggtaaaccagttgcagaacaagaaattggtcacgctttatta
caagaagttgttgcatttgcagaaacttctatttctagacgtaaatttatacttcattat
tttggtgaagactttgataaccaaactggcgaaggtggcgatatggatgataatatgcgt
catccaaaagaaaaagaagaagcttctaaagaagtaactacaatactagacattgttaaa
aaaaccaatgcaaaatacaagtctaaagaactagtaaatgtaatcgtaggtaaatctaac
gcgttaataaattctcataaaacagacgaacaaccattctttggagtaggaaaaaacaaa
gaaaaaagtttctggatggcattaacaagacaaatgctagtcgctggattattaaaaaaa
gatatagaaacttacggtgtaattaaattaacaccagctggtgaagcgtttttagatcaa
ccaacatctttcatgatgacaaaagatcatgactttagccaagatccagatgcagatata
attactgcaacaaaaggtggcggcgcagttgtagatgaacaattaatgaaaatgcttaaa
gacttacgtaagtctaatgctaaaaaattaggagttccaccatttgtgattttccaagat
ccttctttagaagatatggctttaaaatatcctatatctgtagaagaactatctaacgtg
catggtgttggcgaaggtaaagcaaaaaaatacggtaaagattttgtcaaacttatcgct
aaatatgtagaagataatgatattgtaagaccagacgatatggttgtaaagtctacagga
agcaattctggaataaaattatacattattcaaaatgtagatagaaagttaccattaaca
gatatagcgtctgcaaaaggcatggaaatgccagcatttataaaagaaatggaagctata
gtctattctggaaccaaattaaatatcgattattggatagatgaaattttagatgaagac
cagcaagaagaactacacgattattttatggatactgaaaccgataagatagatgtggct
ttagatgaatttgatggtgattacgatgatgaagaattgcgtttataccgaattaaattt
attagtgaagtcgctaattag
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