Mesoflavibacter sp. HG96: C7H62_2116
Help
Entry
C7H62_2116 CDS
T06472
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mesq
Mesoflavibacter sp. HG96
Pathway
mesq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7H62_2116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesq03400
]
C7H62_2116
DNA repair and recombination proteins [BR:
mesq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7H62_2116
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7H62_2116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_14
AAA_25
MeaB
Viral_helicase1
NMDAR2_C
cobW
AAA_15
PRK
BCA_ABC_TP_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QIJ89924
UniProt:
A0A6G7RX90
LinkDB
All DBs
Position
2362650..2365484
Genome browser
AA seq
944 aa
AA seq
DB search
MTNFEENIEVKGARAHNLKNIDVTIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTSKSPRSTVGTITEIYDFLRLLFARGS
DAYSYNTGEKMVSYSDEQIKKLITESYKGKRINVLAPVIRSRKGHYRELFEQIAKQGFVK
VRTDGEIRDLVKGMKLDRYKTHDIEIVIDRLKIDENVDNDKRLTETINTAMYHGDDVLMV
IDQDTQEARYFSRNLMCPSSGISYPNPEPNNFSFNSPKGACPKCNGIGTLYQVNEKKIIP
DDSLSIKAGALAPHGPEKKSWIFKQFETIAQRYNFKLTDPYKSIPDEAKQVILYGGNEKF
SVESKTLGITRDYKIDFEGVANFIENQYNTAESTSLKRWAKDYMDKIECPECEGSRLRKE
SLYFKVNEKNIAELANMDISELSAWFGDLEQHLSKTQLKIAEEIIKEIRARIQFLFDVGL
DYLSLNRSSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNEKLINSLVSLR
DIGNSVIVVEHDKDMIERADHVIDIGPRAGKHGGEIISEGTPNALLKGNTITAQYLNGKM
EIEIPKKRREGNGKFLELKGCTGNNLKNVSVKFPLGKMIGVTGVSGSGKSTLINETLYPI
LNAHYFNGVKKPMPYKSIKGLEHIDKVIDINQSPIGRTPRSNPATYTKTFDEIRSLFAKI
PEAMIRGYKPGRFSFNVAGGRCETCKGGGLRVIEMNFLPDVYVECETCQGKRFNRETLEI
RYKGKSISDVLDMTINEAVDFFENIPKIHKKLKTIKDVGLGYITLGQQSTTLSGGEAQRI
KLATELSKRDTGNTFYILDEPTTGLHFEDIRVLMQVLNKLANKGNTVLIIEHNLDVIKTV
DYIIDIGYEGGKGGGQVVAEGSPEEVAKHKKSHTARFLKKELNS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgacaaattttgaagaaaacattgaagttaaaggcgcaagagcacataacttaaaaaat
atagacgttactattccgcgagaaaaactagttgtaattactggtttgtcaggaagcgga
aaatcgtctttagcgtttgatactatttatgccgaaggacaacgtcgttacatcgaaaca
ttttcggcgtacgctagacaatttttaggcggattagaacgaccagatgtagataaaatt
gatggtttgtcgcccgtaattgctatagaacaaaaaacaaccagcaaatcgccacgttct
accgttggtaccattaccgagatttacgactttttaagactattattcgcaagaggtagt
gacgcttacagttacaatacaggcgaaaaaatggtgagttacagtgatgagcaaattaaa
aaattaattaccgaaagttataaaggtaagcgcattaacgtcttagcaccagtaattagg
tctagaaaaggacattatcgcgagttgtttgagcaaattgcaaaacaaggttttgtaaag
gtgagaacagatggcgaaattagagatttggttaaaggcatgaaactagatcgttacaaa
acgcacgatatagaaattgttatagatcgccttaagatagatgaaaatgtagataacgat
aagcgtttaaccgagacaattaatacagcaatgtatcatggtgatgacgtgttaatggta
attgatcaagatacacaagaagcacgttattttagccgaaatttgatgtgtccaagttct
gggatttcttatccaaatccagaacctaacaacttttcgtttaactcgccaaaaggtgct
tgtccaaaatgtaacggtataggaacgttgtatcaagttaacgagaaaaaaataattcca
gacgattctttatccataaaagctggtgcattagctcctcatggaccagaaaaaaagagc
tggatttttaagcagtttgaaactattgcacaacgctataattttaaattaacagatccg
tacaagtctattcctgacgaagcaaagcaagtgattttatatggcggaaatgagaagttt
tctgttgaaagtaaaacattaggcattactagagattataaaatagattttgaaggtgtc
gctaattttattgaaaaccaatacaatacagcagaatcaacatcattaaaacgttgggca
aaagactatatggacaaaattgaatgtccagaatgtgaaggcagtagattgcgtaaagag
tcgctttattttaaagtaaacgaaaaaaatattgctgaattagccaatatggacattagc
gagctttctgcttggtttggcgatttagaacaacatttaagcaaaacgcaactaaaaatt
gcagaagaaattataaaggaaattcgtgctagaattcaatttttatttgatgtaggatta
gattatttgtcgttaaaccgaagctcaaaatccttatctggtggagaagcacaacgtata
aggttagcaacacaaataggatcgcagttagttggcgtgttatatattttagacgaacct
agtattggcttacatcaacgcgataacgaaaagctaattaacagtttggtgtctttacgt
gatattggtaattcggtaatagttgtagagcacgataaagatatgatagaacgtgccgat
cacgtcatagatataggtccgcgagcaggaaaacatggaggagaaattataagtgaaggt
acgccaaatgcgttattaaaaggtaacaccattacagcgcaataccttaatggtaaaatg
gaaatagaaatccctaaaaagcgtcgtgaaggtaatggtaagtttttagagcttaaaggc
tgtacaggtaataacttaaagaatgtttctgtaaagtttcctttaggaaaaatgataggt
gttacaggtgtttcaggaagcggaaaatcgacgttaattaatgaaacgttgtatccaatt
ttaaacgctcattactttaatggtgttaaaaaaccaatgccatacaaaagcattaaaggt
ttagaacatattgataaagttattgatattaaccaatcgccaattggtcgtacaccacga
agtaatcctgcaacctataccaaaacttttgacgaaatacgtagtctttttgccaaaata
ccagaagcgatgatacgtggttataaaccaggtagatttagttttaatgtcgctggcgga
cgttgtgaaacctgtaaaggtggcggattacgtgtaatagaaatgaactttttaccagat
gtttatgtagaatgtgaaacgtgtcaaggtaaacgctttaatcgcgaaactttagaaata
agatacaaaggaaaaagcattagtgatgtattagatatgaccattaatgaagcggtagac
ttttttgaaaacattcctaaaattcataaaaaacttaagaccataaaagatgttggatta
ggttacatcactttaggacaacaaagtacaacgctttctggtggagaagcgcaacgtata
aaattagcaaccgagctaagtaaacgcgatacaggaaatactttttacattttagatgaa
ccaacaacaggacttcattttgaagatataagagtgttaatgcaagtgttaaataaatta
gcaaataaaggtaataccgtgttaattatagagcataatttagatgtaattaaaacggta
gattatattatagatattggttatgaaggcggaaaaggtggcggacaagtagttgctgaa
ggttctccagaagaagtagcaaaacataaaaagagtcatacagcacgatttttaaagaaa
gaattaaactcttaa
DBGET
integrated database retrieval system