Mesorhizobium sp. 8: FGU64_02300
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Entry
FGU64_02300 CDS
T07809
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mesr
Mesorhizobium sp. 8
Pathway
mesr03030
DNA replication
mesr03430
Mismatch repair
mesr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGU64_02300 (dnaE)
03430 Mismatch repair
FGU64_02300 (dnaE)
03440 Homologous recombination
FGU64_02300 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesr03032
]
FGU64_02300 (dnaE)
03400 DNA repair and recombination proteins [BR:
mesr03400
]
FGU64_02300 (dnaE)
Enzymes [BR:
mesr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGU64_02300 (dnaE)
DNA replication proteins [BR:
mesr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FGU64_02300 (dnaE)
DNA repair and recombination proteins [BR:
mesr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FGU64_02300 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QDB99327
LinkDB
All DBs
Position
498467..501994
Genome browser
AA seq
1175 aa
AA seq
DB search
MSDERLPRDPLKREALVQAAKPERPIRPFIHLRVHSAYSLLEGALQLGKIVGHALKDEAP
AIAVTDTNNLFGALEFAQKAVKDGVQPIVGCQLDLAFSGEPADGQRDRRRSGPDLRPVVL
IAASQAGYANLVRLVSRVYLDTPSGEALHISTDMLEALAEGIICLTGGPRGPIGKALRDG
HTELAESRLLALKSLFGDRLYVELERMGDYDRAIEKATLELAYRHELPLVATNEAFFQAR
EDYEAHDALIAIAEGAVVAADDRRRLSPNNHLKSQAEMAALFADLPEAIDNTVEIALRCS
YYPVNRKPILPRFAGAGVADPEAAERAEAEELKRQAREGLVKRLAAHGPTVGHTQEDYDK
RLEYELGIIEKMKFPGYFLIVSDFIKWAKAQDIPVGPGRGSGAGSLVAYALTITDIDPLR
FSLLFERFLNPDRVSMPDFDIDFCQDRREEVIHYVQGKYGRDQVGQIITFGTLQARAVLR
DVGRVLQMPYGQVDRLTKMVPQNPANPVKLADAIANEPRFAEEAEKEPVVQTLLAMAQKL
EGLYRHASTHAAGIVIGDRPLSELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKT
LTVLDIAVKLIRRRGVDIDLAHIPLDDEKTYSMLSRGEVVGVFQVESAGMRKALIGMKPD
RIEDLIALVALYRPGPMENIPTYNARKHGEEETASIHPKIDHLVKETQGVIVYQEQVMQI
AQELAGYSLGEADLLRRAMGKKIRAEMDKQRERFVSGAVERGVSKPQADFIFDLLAKFAD
YGFNKSHAAAYAVVSYQTAYLKAHYPVEFLAASMTLDMANTDKLADFRQDAMRLGIEVVA
PSVQTSFRDFEVAENRIFYSLAAIKGVGDAAVHHIVERRGDKPFKSLADFCERIDPKIVG
KRVFESLTMAGALDCFGHDRAAMMAGVDRMMGLAALAHENAVLGQADIFGASLGAQSQAL
ALPAAEPWLPADRLHREFQVVGFYLSAHPLDEYKTVMEKLRVQNWAEFSAAVKRGATAGR
LAGTVTSKQERKTRTGNKMGVVNFSDMTGQYEAVMFSETLVQYRDMLEPGKSVVITVSAE
DRPEGINMRIQTVQSLDDMAGQVQKSLRIFLRDASPVGTLASQLGVKGEGQVSFVIIKGE
AQGEVEVALPDRYRIGPREASALRAVPGVVEVELV
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaaagacttccccgcgatcccctgaagcgcgaggcgcttgtgcaggcggcc
aagccggaaaggccgatccgtccctttatccatctgcgcgtgcattccgcctattcgctg
ctggaaggggccctgcagctcggcaagatcgtcggccatgccttgaaggacgaggcgccg
gccatcgccgtcaccgacaccaacaatctgttcggcgcgctggaattcgcccagaaggcg
gtgaaggacggcgtccagcccatcgtcggctgccagctcgacctggcgttctcgggcgag
cccgccgacggccagcgcgaccggcgccggtccggtcccgacttgcgccctgtggtgctg
atcgcggcgagccaggccggctacgccaatctcgtgcggctggtcagccgcgtctatctc
gacacgccctcgggcgaggcgctgcatatctccaccgatatgctggaggcgcttgccgag
ggcatcatatgcctgaccggcgggccgcgcgggccgatcggcaaggcgctgcgcgacggc
cacaccgaactggccgagagccgccttctggcgctcaagagcctgttcggcgaccggctc
tatgtcgagctggaacgcatgggggattatgaccgggcgatcgagaaggccacgctggaa
ctggcctatcggcacgaactgccgctggtcgccaccaacgaggcgttctttcaggcgcgc
gaggactatgaggcgcatgacgcgctgatcgccatcgccgagggcgcggtggtcgcggcc
gacgaccggcgccgcctgtcgcccaacaaccacctgaagtctcaggccgagatggcggcc
ttgttcgccgacctgccggaagcgatcgacaacaccgtcgagatcgccctgcgctgctcc
tattatccggtgaaccgcaagccgatcctgccgcgtttcgccggcgcgggcgtcgccgac
ccggaggccgccgaaagggcggaagcggaggaattgaaacgtcaggcgcgcgaagggctt
gtgaagcggctggccgcacacggccccacagtcggccatacgcaagaggactacgacaag
cggctggaatacgagctgggcatcatcgagaagatgaagttccccggctacttcctgatc
gtctcggacttcatcaaatgggcgaaggcgcaggacattcccgtcgggccggggcgcggc
tccggcgccggcagcctcgtcgcctacgccctcaccatcaccgacatcgacccgttgcgt
ttctcgctactgttcgagcgcttcctcaaccccgaccgcgtgtcgatgcccgacttcgac
atcgacttctgccaggaccggcgtgaggaggtcatccactacgtgcagggcaaatacggc
cgcgaccaggtcggccagatcatcaccttcggaaccttgcaggcgagggcggtgctgcgc
gacgtcggccgcgtgctgcagatgccctatggccaggtggaccgcctgaccaagatggtg
ccgcagaacccggccaatccggtcaagctggccgacgccatcgccaacgagccacgcttc
gccgaggaggcggagaaggagccggtcgtccagacgttgcttgccatggcgcagaagctg
gaagggctttatcgccatgcctccacgcacgccgccggcatcgtcatcggcgacaggccg
ctgtccgagctggtgccgatgtaccgcgatccgcgctcggacatgccggtcacccagttc
aacatgaaatatgtcgagcaggcgggactggtgaagttcgacttcctcggcctgaagacg
ctgacggtgctcgacatcgccgtcaagctgatccgccggcggggcgtggacatcgatctg
gcgcatatcccgctcgatgacgagaagacctattccatgctgtcgcgcggcgaggttgtc
ggcgtgttccaggtggaaagcgcgggcatgcgcaaggcgctgatcggcatgaagccggat
cgcatcgaggacctgatcgcgctggtggcgctctatcgccccggtccgatggagaacatc
ccgacctacaatgcgagaaagcacggcgaggaggagaccgcctccatccatcccaagatc
gaccatctggtgaaggagacgcaaggcgtcatcgtctaccaggagcaggtcatgcagatc
gcgcaggaactggccggctattcgctcggcgaagccgatctgttgcgccgcgccatgggc
aagaagatccgcgccgagatggacaagcagcgcgagcgcttcgtttccggcgccgtcgag
cgcggcgtttccaagccgcaggccgacttcattttcgaccttctggccaagttcgccgac
tacggcttcaacaagtcgcacgccgccgcctatgcggtcgtgtcctaccagacggcctac
ctgaaggcgcattatccggtcgagttcctcgcggcctcgatgacgctcgacatggccaac
accgacaagctggccgacttccggcaggacgcgatgcgtctcggcatcgaggtggttgcg
ccctcggtgcagacctcgttccgcgacttcgaggtagcggaaaaccgcatcttctattcg
ctggctgccatcaagggtgtcggcgacgccgccgtccatcacatcgtcgaaaggcgcggc
gacaagccgttcaagagcctcgccgacttctgcgagcggatcgaccccaagatcgtggga
aaacgcgttttcgaaagcctgaccatggccggcgcgctggattgcttcggccacgaccgc
gccgccatgatggccggcgtcgatcgcatgatggggttggccgcgcttgcgcacgagaac
gccgtgctcggccaggccgatattttcggtgcttcgctgggggcgcaatcgcaggcgctg
gcgttgccggccgccgagccgtggctgccggcggacaggctgcaccgcgaattccaggtc
gtcggcttctacctgtcggcgcatccgctcgacgagtacaagacggtgatggaaaagctg
cgcgtgcagaactgggcggagttttcagccgccgtcaagcgcggcgccacggccggccga
ctggcgggcacggtgacctcgaagcaggagcgcaagacccggaccggcaacaagatgggc
gtcgtcaacttctccgacatgaccggccagtacgaggccgtgatgttttcggagacgctg
gtgcagtatcgcgacatgctggaacccggcaaatccgtggtcatcaccgtctcggcggaa
gatcggccggaaggcatcaacatgcgcatccagactgtccagtcgctggacgatatggcc
ggccaggtgcagaaatcgctgcgcattttcctgcgcgatgccagccccgtcggcacgctg
gccagccagctcggcgtgaagggcgaagggcaggtgagcttcgtcatcatcaagggcgag
gcccagggcgaggtcgaggtcgcgctgccggaccgctatcgcatcggcccgcgcgaggcg
tccgccctgcgcgccgttcccggtgtggtcgaagtggaactggtgtga
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