Mesorhizobium sp. 8: FGU64_03300
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Entry
FGU64_03300 CDS
T07809
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mesr
Mesorhizobium sp. 8
Pathway
mesr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGU64_03300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesr03019
]
FGU64_03300
Enzymes [BR:
mesr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGU64_03300
Messenger RNA biogenesis [BR:
mesr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGU64_03300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
HEM4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDB99505
LinkDB
All DBs
Position
717449..719047
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AA seq
532 aa
AA seq
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MPWARQRSRADNASAALSFTKSITSGGLRPAAILFAATRSHERRNVLTNENNAEPTGFAA
LGISGQLLKATHAAGFTEPKPIQVEAIPAQLEGRDVLGIAQTGSGKTAAFALPILSKIMA
LGTKRRPKTARALILAPTRELAVQIEDTIKILAKGAHVSTALVLGGVSRFSQVKRIAPGV
DFLVATPGRLTDLVREKDVDLSDTTWLVLDEADRMLDMGFINDVRRIAKGTHPGRQTALF
SATMPQEIADLAKGLLRDPLRVEVAPQGTTAAEIKQSVVLARTKQKRRLLSTMLADEAMR
SVIVFARTKHGADRVTKDLERDGFEAAVIHGNKSQNARQKALNGFRDGSVRILVATDIAA
RGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGQDGVAITLVDPTENAKLRQVEKIIRM
KLPVIADHLGEPEPAREPRQDGERRLEAANDRRPQPQGRKPGNGGRNESRGEAGQGERRE
GGFGKKRFGGKPNGKPAFAKKGGAERAVDNGSAKPFRGKKRFGGRNRPARAA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgccgtgggcacgacagcgcagccgagcggacaatgcgtccgccgccttgtcgttcaca
aaatccattacatccggcgggttgcgccccgccgcgatcctgtttgcggccacgaggtcg
catgaaagaagaaacgttttgaccaacgaaaacaatgcggagccgaccggcttcgccgca
ctcggaatttccggccagcttttgaaggccacccatgccgccggcttcaccgaaccgaag
ccgatccaggtcgaggccattccggctcagctggagggccgcgacgttctcggcatcgcc
cagaccggctcgggcaagacagccgccttcgcgctgccgatcctgtcgaagatcatggcg
ctcggcacgaagcgccggccgaagacggcgcgcgcgctgatccttgcgcccacacgcgag
ctcgccgtgcagatcgaagataccatcaagatcctggccaaaggcgcgcatgtctccaca
gccctggtactcggcggcgtctcccgcttcagccaggtcaagcgcatcgcgcccggcgtc
gatttcctcgtcgccacccccggccgcctgaccgatctggtgcgcgagaaggacgtcgat
ctctccgacaccacctggctggtgctggacgaagccgaccgcatgctcgacatgggcttc
atcaacgatgtgcgccgcatcgccaagggcacccatccgggccgccagacggcgctgttt
tcggccaccatgccgcaggagatcgccgacctcgccaagggcctgctgcgcgatccgctg
cgcgtcgaggtcgccccgcagggcacgacggctgcggaaatcaagcagagcgtcgtcctc
gcccgcacgaaacagaagcgccggctgctgtccaccatgctggccgacgaggcgatgcgc
tccgtcatcgtctttgcccgcaccaagcacggcgccgaccgcgtcaccaaggatctggag
cgcgacggcttcgaagccgccgtcatccacggcaacaagagccagaatgcccgccagaag
gcgctcaacggttttcgtgacggctcggtgcgcattctggttgcgacggacatcgccgcg
cgcggcatcgacgtgcccggcatcagccacgtcgtcaacttcgacctgccggacgaggcg
gaaagctacgtccaccgcatcggtcgcacaggccgcaatgggcaggacggcgtggcgatc
acgctggtcgacccgaccgagaacgccaagctgcgccaggtcgagaagatcatccgcatg
aagctgccggtgatcgccgatcatctcggcgagccagagcccgcacgcgaaccgcgccag
gacggcgagcgccgcctggaggctgccaacgaccgtcggccacagccgcagggccgcaaa
cccggtaatggcggacggaacgaaagccgcggtgaagccggacagggcgagcgtcgtgag
ggcgggttcggcaagaagcgcttcggcggcaagccgaacggaaagccggccttcgccaag
aaaggcggggccgaacgtgccgtcgacaacggcagcgccaagccgttccgcggcaagaag
cgtttcggcggtcgcaaccggccggcgcgcgcggcctga
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