Mesorhizobium sp. 8: FGU64_11125
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Entry
FGU64_11125 CDS
T07809
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mesr
Mesorhizobium sp. 8
Pathway
mesr03030
DNA replication
mesr03410
Base excision repair
mesr03420
Nucleotide excision repair
mesr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FGU64_11125 (polA)
03410 Base excision repair
FGU64_11125 (polA)
03420 Nucleotide excision repair
FGU64_11125 (polA)
03440 Homologous recombination
FGU64_11125 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesr03032
]
FGU64_11125 (polA)
03400 DNA repair and recombination proteins [BR:
mesr03400
]
FGU64_11125 (polA)
Enzymes [BR:
mesr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FGU64_11125 (polA)
DNA replication proteins [BR:
mesr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FGU64_11125 (polA)
DNA repair and recombination proteins [BR:
mesr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FGU64_11125 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FGU64_11125 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH_2
Taq-exonuc
DNA_polI_exo1
HHH
IMS_HHH
CagL
Motif
Other DBs
NCBI-ProteinID:
QDC00926
LinkDB
All DBs
Position
2296260..2299214
Genome browser
AA seq
984 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLSRKSDGLPVGAVSGFCNMLWKLLREARNTDVGVT
PTHFAVIFDYSSKTFRNELYPEYKANRSAPPEDLIPQFGLIREATRAFGLPCVEMEGFEA
DDLIATYCRLACEAGGDTTIVSSDKDLMQLVGPTVGMYDPMKDRQIGIPEVIEKWGVPPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGNLDTLLERAGEIKQDKRRQSIIDNA
DKARISRELVTLKTDVPTAAGEGLDDFVLDPADGPKLIAFLKAMEFTSLTRRVAEATGTE
IGEVEAASISVERADTAHGPDVGAGAEVPAAASQGNGDAAAMSPAAKEEGDTPSLLSALR
AEAATADKIDVNAYHCVRDLPTLQRWVEEAREAGIVAFDTETTSLDPMQAELCGFSLAIR
PGHACYVPVGHKNGQDDLLGGGLVDGQIPIREALAAIKPLMEDRSVLKIAQNLKYDLVIM
QRHGVDVVAYDDTMLISYVLDAGVTGGHGMDFLADKWLGHKTIPFKDVAGSGKSFIGFHQ
VPLDRATCYAAEDADVTLRLWMVLKPRLAAKGLVSVYERLERPLVPVLARMEQRGISVDR
QILSRLSGDLAQGAARLEEDIYQLIGERINIGSPKQLGDILFGRMGLPGGSKTKSGQWST
SAQLLEDLAAEGHELPRRIVDWRQLTKLKSTYTDALPGFINPETKRVHTSYALAATTTGR
LSSSDPNLQNIPVRTAEGRKIRTAFIAEPGHKLISADYSQIELRVLAHVADIPQLKQAFA
DGADIHAITASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIPREEAGAYI
KKYFERFPGIRDYMDETKAFARENGYVETVFGRRIHYPEIRAANPSLRAFNERASINARL
QGTAADIIRRAMIRMDDALLKANLGARMLLQVHDELIFETVEAEVDATIPVVKAVMENAA
MPAVSLSVPLQVDARAADNWDEAH
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctcgtcgacggctccggctacatcttccgcgcctat
cacgcgctgccgccgctgtcgcgcaagtcggacggcctgccggtcggcgccgtctccggc
ttctgcaacatgctctggaagctgctgcgcgaagcgcgcaacaccgacgtcggcgtcacg
ccgacccatttcgccgtcatcttcgactattcctccaagaccttccgcaacgaactctat
cccgaatacaaggccaaccgctcggccccgccggaagacctgatcccgcagttcggcctg
atccgcgaggccacccgcgccttcggcctgccctgcgtcgagatggagggcttcgaggcc
gacgacctcatcgccacctattgccggctcgcctgcgaagccggcggcgacaccaccatc
gtctcttccgacaaagacctgatgcagctggtcggcccgaccgtcggcatgtacgacccg
atgaaggaccgccagatcggcattcccgaggtcatcgagaagtggggcgtgccgccggaa
aagatgatcgacctgcaggcactgaccggcgattcggtcgacaacgtgcctggcgtgccg
ggcatcggcccgaagaccgccgcgcaactcttggaacagttcggcaatctcgacacgttg
ctggagcgcgccggcgagatcaagcaggacaagcgccgccagtcgatcatcgacaacgcc
gacaaggcgcgcatctcgcgcgaactggtgacgctgaagaccgatgttccgaccgcggcc
ggcgaaggcctggacgactttgttctcgatcccgccgacgggccgaagctgatcgccttc
ctgaaagcgatggaattcacctcgctgacgcggcgggtcgccgaagcgaccggcaccgag
atcggcgaggtcgaggccgcgtcgatctcggtcgaacgcgccgacaccgcgcatgggccc
gatgtgggtgccggtgccgaggtcccggcagcggcctcgcaaggcaatggcgatgcggcg
gcgatgagcccggccgctaaggaagaaggcgacaccccttccctgctgtcggccctgcgc
gccgaagccgccaccgccgacaagatcgacgtcaacgcctatcattgcgtccgcgatctg
ccgaccttgcagcgctgggtcgaggaagcgcgcgaggcaggcatcgtcgccttcgacacc
gaaaccacctcgctcgaccccatgcaggcggaactctgcggcttctcgctcgccatccga
cccggccacgcttgctatgtgccggtcggccacaagaacggccaggacgatcttctcggc
ggcgggctggtcgacggccagattccgattcgcgaggcgcttgccgcgatcaagccgctg
atggaggacaggtcggtcctcaagatcgcgcagaacctgaaatacgacctcgtcatcatg
cagcgtcacggcgtcgacgtcgtggcctacgacgacacgatgctgatctcctacgtgctc
gacgcaggcgtcacaggcggtcacggcatggatttcctggccgacaaatggctcggccac
aagacgatccccttcaaggacgtcgccggctccggcaagagcttcatcggcttccatcag
gtgccgctcgacagggcgacctgctacgccgccgaggacgccgacgtgacgctcaggctc
tggatggtgctgaagccgcgcctcgccgccaagggcctcgtttcggtctacgagcggctg
gagcggccgctggtgccggtgctggcgcgcatggaacagcgcggcatctccgtcgaccgg
cagattctctcccgcctctcgggtgacctcgcccagggcgccgcccggctggaagaggac
atctatcaactgatcggcgaacgcatcaacatcggctcgcccaagcagctcggcgacatt
ctgttcggtcgcatgggcctgccgggcggctccaagaccaagtccggacaatggtccact
tcggcgcagcttctggaagacctcgccgccgaaggccacgaactgccgcgcaggatcgtc
gactggcgccagctcaccaagctgaaatcgacctacaccgacgccctgccgggcttcatc
aatccagaaacgaaacgcgtccatacgtcttatgcactggccgcgacgacgaccggacgg
ctgtcgtcttccgatccgaaccttcagaacattccggtgcgcaccgccgaaggccgcaag
atccgtaccgccttcatcgccgagccaggccacaagctgatctcggccgactacagtcag
atcgagcttcgcgtgctggcgcatgtcgccgatatcccgcagttgaagcaggctttcgcg
gacggcgccgacatccacgccatcaccgcttccgagatgttcggcgttccggtcgaaggc
atgccgtcggaagtccgccgtcgcgccaaggcgatcaacttcggcatcatctacggcatt
tccgccttcggcctggccaaccagctctccatcccgcgcgaggaagccggcgcctacatc
aagaaatacttcgagcgcttccccggcatccgcgactacatggacgagacgaaggccttc
gctcgcgagaacggctatgtcgagaccgtgttcggccgccgcatccactatcccgaaatc
cgcgcggccaacccatcgctgcgcgccttcaacgaacgcgcctcgatcaatgcccgcctg
cagggcaccgcagccgacatcatccgccgtgccatgatccgcatggacgacgctctgctg
aaggccaatctcggcgcccgcatgctcttgcaagtgcatgacgaactgatctttgagacg
gtcgaagctgaggtcgacgcgaccatcccggtggtgaaggccgtcatggagaatgcggcg
atgccggcggtatcgctgtcggtgccgcttcaggtcgacgcacgcgctgccgacaactgg
gacgaggcgcattga
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