Mesorhizobium sp. 8: FGU64_14435
Help
Entry
FGU64_14435 CDS
T07809
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mesr
Mesorhizobium sp. 8
Pathway
mesr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGU64_14435 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesr03019
]
FGU64_14435 (recQ)
03400 DNA repair and recombination proteins [BR:
mesr03400
]
FGU64_14435 (recQ)
Enzymes [BR:
mesr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FGU64_14435 (recQ)
Messenger RNA biogenesis [BR:
mesr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGU64_14435 (recQ)
DNA repair and recombination proteins [BR:
mesr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FGU64_14435 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
zf-CCCH_UNK-like_4th
HHH
Motif
Other DBs
NCBI-ProteinID:
QDC01524
LinkDB
All DBs
Position
2951613..2953415
Genome browser
AA seq
600 aa
AA seq
DB search
MSADPLHILKTVYGYDAFRGPQADIVRHVTAGNNAFVLMPTGGGKSLCYQIPAMARPGMG
LVVSPLLALMADQVAALRQAGVKAAAFNSDLPSDERRALWRDVATGGLDLLYMAPETLLR
PEILERLSRVPLSLIAIDEAHCLSQWGHDFRPSYRQLDALVAAFPDTPRMALTATADAPT
RAEILAHLRISEGDAFIAGFDRPNIRYEIREKDNPRAQLARFLKDHAGESGIVYCLSKRK
TEETAAWLCAQGYDALPYHGGMDRAERQANQTRFQNDEAVVMVATIAFGMGIDKPDVRFV
AHIDLPGSIEAYYQETGRAGRDGLPSDALMLYGSEDVALRSRFIEESEAPEQRKRMERQK
LDALLGLAETATCRRQALLSYFGDRCEPCGNCDTCAEPPRLFDGTIAAQKALSCIHRTGE
RFGQAYVVDVLLGVEDERILRFGHDGISTFGIGKEHDNRTWRAILRQLVALRLIDVDLAG
HGGLSISEAGRRFLREKQTLMLRVPAAPRARQGKVSRQQASATLPDTDRALFQALREKRM
EIARAQNVPPYVIFHDRTLIEIAAARPTSRREMAAVPGVGEAKLERYGPAFLSVITEHAD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgccgatcccctgcatatcctgaaaacggtctatggctacgacgcgtttcgcgga
ccgcaggctgacatcgtccgccatgtgacggccggcaacaacgccttcgtcctgatgccg
acgggtggcggcaaatccctgtgctaccagattccggcgatggcgcgccccggcatgggt
cttgtcgtctcgccgctgctggccctcatggccgaccaggtggcggccctgcgccaggcg
ggcgtcaaggccgccgccttcaattccgacctgcccagcgacgagcggcgcgctttgtgg
cgggatgtggccaccggcgggctcgacctgctctatatggcgccggagacgctgctcaga
ccggagattctggaacgccttagccgggtgccattgtcgctgatcgccatcgacgaggcg
cattgcctgtcgcagtggggtcacgacttccgcccctcttaccggcaactcgacgcgctg
gtcgcggcgtttcccgacacgccgcgcatggcgctgacggccaccgccgatgcgccgaca
cgcgccgagatcctcgcgcatctgcggatttccgaaggcgacgccttcatcgccggcttc
gaccgccccaacatccgttatgaaatccgcgagaaggacaacccgcgggcgcagttggcg
cgcttcctgaaggaccacgccggcgaaagcggcatcgtctattgcctgtcgaaacggaag
acggaagaaaccgccgcctggctttgcgcccagggctacgacgcccttccctatcacggc
ggcatggacagggcggagcgccaggccaaccagacgcgcttccagaacgacgaggctgtc
gtcatggtggccaccatcgccttcggcatgggcatcgacaagccggacgtgcgctttgtc
gcccatatcgacctgccgggcagcatcgaggcctactatcaggagacgggacgcgccggg
cgtgacggcctgccctccgacgcgctgatgctctacggctccgaggacgtcgcgctgcgc
agccgcttcatcgaggagtcggaagcgcccgagcagcgcaagcgcatggagcggcagaag
ctcgacgcgctgctcgggcttgccgaaacggcgacctgtcgccgccaggcgctgctctcc
tatttcggcgaccgctgcgagccttgcggcaactgtgacacctgcgccgagccgccgcgc
ctgttcgacggaaccatcgcggcgcagaaagcgctttcctgtatccaccggactggcgaa
cgcttcggccaggcctatgtcgtcgacgttcttctgggcgtcgaagatgagcgcatcctt
cgcttcggccatgacggcatttccacctttggcatcggcaaggagcacgacaaccgcacg
tggcgggcgatcctgcgccagctggtcgcgctcaggctgatcgatgtcgatctcgccggc
cacggcggcctgtcgatttcagaggcgggccggcggttcctgcgcgaaaagcagaccctc
atgctgcgcgtgccggcggcaccgcgggcgcggcaggggaaagtttcgcgccagcaggcg
tcggccaccctgcccgacaccgatcgcgcgttgttccaggcgttgcgggaaaagcgcatg
gagatcgcccgcgcgcagaacgtgccgccctacgtgattttccatgacaggacgctaatt
gaaatcgccgccgcgcgtcctacgtcgcgccgcgagatggcggccgttcccggtgtcggc
gaggccaagctggagcgttatggtcctgctttcctgtcagtgattaccgagcatgcggac
tga
Mesorhizobium sp. 8: FGU64_19405
Help
Entry
FGU64_19405 CDS
T07809
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mesr
Mesorhizobium sp. 8
Pathway
mesr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FGU64_19405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesr03019
]
FGU64_19405
03009 Ribosome biogenesis [BR:
mesr03009
]
FGU64_19405
Enzymes [BR:
mesr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FGU64_19405
Messenger RNA biogenesis [BR:
mesr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FGU64_19405
Ribosome biogenesis [BR:
mesr03009
]
Prokaryotic type
rRNA helicases
FGU64_19405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
DUF562
Cas3-like_C_2
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
QDC02425
LinkDB
All DBs
Position
4019277..4021097
Genome browser
AA seq
606 aa
AA seq
DB search
MTPTDDAASLPTTIHPALASALAAKGYSQLTPVQTEMANGGHGEADLLVSAQTGSGKTVA
FGIAIASTLLGNAEQFEAAGRPLGLVIAPTRELAIQVRRELDWLYAATQIETATCVGGMD
MRKERRALERGAHLVVGTPGRLRDHITKGALDLGVIRAVVLDEADEMLDLGFREDLEFIL
GAAPAGRRTLLFSATVPRGIAELAGNFQRDAVRITATASTEQHADIEYQMMLVRRDEREH
AVINALLDSDSGGALVFCHTREAVRHLTARLANRGFSVVSLSGEMAQSERSNALQAMRDG
RAHVCVATDVAARGIDLPNLDLVIHADVPSNPATLLHRSGRTGRAGRKGICVLIVPEHRR
GAAQRVLALAKLSAAVRAAPGIAEIEARYRRQILDTALAAAEPDGAEATFVAELLATATP
ERIAATFLRQQLAARPMPEDLSPLPVADMQARKPKRDRRTEGEHGAPPTREARKPDMEGG
VWFTLSLGRKQRADPKWLLPMICKAGGVSKRDVGSIRIDDTETRFEVAADKAAGFAEQIK
RPGGIERGIVIEPAAEGRKASWRARPKFRKDGKLDQKPFRKPHRKGGSAEHHASGKPKGK
RPKRPA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgaccgacgacgcagcatccctgccgaccaccatccatcctgccctggcttcc
gccctggcggcgaagggttacagccagttgacgccggtccagacggagatggccaacggc
ggccatggcgaggccgaccttctggtctcggcgcagaccggctcgggcaagacggttgcc
ttcggcatcgcgatcgcctcgacgctgctcggcaacgcggaacaattcgaagcggcgggg
cgaccgctcgggctggtcatcgcgccgacacgcgaactggcgatccaggtgcggcgggaa
ctcgactggctctacgcggcaacgcaaatcgagaccgcgacctgcgtcggcggcatggac
atgcgcaaggagcgtcgtgcgctggagcgtggtgcgcatcttgtcgtcggtacgccggga
cggttgcgtgaccacatcaccaagggcgcgttggaccttggcgtgattcgcgccgtggtg
ctggacgaagccgacgagatgcttgacctcggtttccgcgaggatctcgaattcatcctc
ggcgctgcaccggccgggcgccggacgctgctgttctcggcgacggtgccgcgcggcatc
gcggaactggccgggaatttccagagggacgcggtgcgcatcacggcgaccgcttccacc
gaacagcacgccgacatcgaataccagatgatgctggtgcggcgcgacgaacgcgaacat
gccgtcatcaatgcgctactcgattccgacagcggcggcgcgctggtgttctgccatacg
cgcgaggcggtgcggcacctgaccgcgcggctggccaaccgcggcttctccgtcgtctca
ttgtcgggcgagatggcacagtccgagcgatcaaacgccctgcaggccatgcgggacggc
cgcgcgcatgtctgtgtagcgaccgacgtcgcagcgcgcggcatcgacctgccgaatctc
gacctggtgatccatgcggacgtaccgagcaaccccgcgacgctgctccaccgttcgggc
cggacgggacgagccggacgcaaggggatttgcgtgctcatcgtgcccgagcacaggcgc
ggcgccgcccagcgcgtgttggcactcgccaagctttcggccgctgtgcgggccgctccc
ggcatagccgagatcgaggcacgttaccgcaggcagatcctcgacactgcccttgcggcc
gccgaaccagacggagcggaagcgacgttcgtggctgaactgctcgcgacggcaacgccg
gagcgtatcgccgccaccttcctgcgccaacaactagcggcgcgaccgatgccggaggac
ctttctccgctgcctgtcgccgacatgcaggcgagaaagcccaaacgcgacaggcggacc
gaaggcgagcacggcgcgccgccaacgcgcgaggcgcgcaagcccgatatggagggcggc
gtctggttcacgctgtcgctcggtcgcaagcagcgcgccgacccgaagtggctgctgccg
atgatctgcaaggccggcggcgtgtcgaagcgcgacgtcggctcaatcaggatcgacgac
accgaaacccgcttcgaggtcgccgccgacaaggcggccggtttcgccgagcagatcaag
cgaccgggcggcatcgagcggggtatcgtcatcgagcctgccgcggaggggcgcaaggca
tcgtggcgggcgaggccgaagttccgcaaagacggaaagctcgaccagaagccgttcagg
aagccgcaccgcaagggcggttcggctgagcatcacgcttccggcaaaccgaaaggcaaa
aggccgaaacgcccggcgtaa
DBGET
integrated database retrieval system
