Mesorhizobium sp. 8: FGU64_17455
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Entry
FGU64_17455 CDS
T07809
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
mesr
Mesorhizobium sp. 8
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesr03032
]
FGU64_17455 (gyrB)
03400 DNA repair and recombination proteins [BR:
mesr03400
]
FGU64_17455 (gyrB)
Enzymes [BR:
mesr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FGU64_17455 (gyrB)
DNA replication proteins [BR:
mesr03032
]
Prokaryotic type
DNA Topoisomerases
FGU64_17455 (gyrB)
DNA repair and recombination proteins [BR:
mesr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FGU64_17455 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
GyrB_insert
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QDC02073
UniProt:
A0A5B8B6S0
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Position
complement(3604719..3607196)
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AA seq
825 aa
AA seq
DB search
MSDELENSNGEAAGYGADSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEVVDNAIDE
ALAGHADLVTVTLNPDGSCTVIDNGRGIPVGMHPSEGVSAAEVIMTQLHAGGKFDQNSYK
VSGGLHGVGVSVVNALSVWLKLTIRRDGKVHEIRFSHGDADAPLAVTGSYQPNHQPGTNE
GRSGTEVTFLPSPDTFKGVTEFDYATLEHRLRELAFLNSGVRILLTDKRRADIKTQELHY
EGGLEEFVKFLDRAKKPLIEKPIAIRNERDGIAVEVAMWWNDSYHENVLAFTNNIPQRDG
GTHLAGFRGALTRQVTGYADSAGISKKEKVQLTGDDCREGLTAVLSVKVPDPKFSSQTKD
KLVSSEVRPVVESLVNEALGTWLEEHPAEAKTLVGKVVEAAAAREAARKARELTRRKGVL
DITSLPGKLADCQERDPAKSEIFIVEGDSAGGSAKGGRSRQNQAILPLRGKILNVERARF
DRMLSSDMIGTLITALGTSIGKDEFNIEKLRYHKIIIMTDADVDGAHIRTLLLTFFFRQM
PEVIEGGYLYIAQPPLYKVSRGKSSQYLKDESAFEEYLIDSGLDEASLTLGSGEVRVGND
LRAAVEDALAVRQLINGLHTRYSRAVVEQAAIAGGLNPDVFSDLGRANAMAEKIAERLDL
IAEDTERGWTGATSTSNEGTGGYVFERTVRGVREFVALDMGLINSADARALDRYATRLGE
VYGTPPVLRRKENSEVIVGPLALLSAVFSTGKKGLTMQRYKGLGEMNAEQLWETTLDPNV
RSLLQVKVSDATDADSLFTRLMGDEVEPRREFIQENALSVANLDI
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgagctggaaaatagcaacggcgaggcggccgggtacggcgccgattccatc
aaggttctcaagggcctggatgcggtgcgcaagcggccgggcatgtatatcggcgacacc
gacgacggctcgggcctgcaccatatggtctacgaggtggtggataacgccatcgacgag
gcgctggccggccatgccgacctggtgacggtgacgctcaatccggacggttcctgcacg
gtgatcgacaacgggcgcggcatcccggtcggcatgcatccttccgagggcgtgtcggcg
gcggaagtcatcatgacgcagctccatgccggcggaaagttcgaccagaactcctacaag
gtgtccggcggcctgcacggcgtcggcgtctcggtggtcaacgcgctgtcggtgtggctg
aagctgacgatccgccgcgacggcaaggtccacgaaatacgcttttcccacggcgacgcc
gatgcgccgctggccgtgaccggcagctaccaacccaatcaccagcccggcaccaacgaa
ggccgcagcggcacggaagtgaccttcctgccctcgcccgacaccttcaagggcgtcacc
gaattcgactacgcgacgctggagcaccggctgcgcgaactcgccttcctgaattccggc
gtgcggatccttctgaccgacaagcgccgcgccgacatcaagacgcaggaactgcactac
gaaggcggtctggaggagttcgtcaagttcctggaccgcgcgaagaagccgctgatcgaa
aagccgatcgccatcaggaacgagcgcgacggcatcgccgtcgaggtcgccatgtggtgg
aacgacagctaccacgagaacgtgctcgccttcaccaacaacatcccgcagcgcgacggc
ggcacgcatctggccggtttccgcggcgccctgaccaggcaggtgaccggctatgccgat
tccgccggcatctccaagaaggagaaggtacagctgaccggcgacgactgccgcgagggc
ctgacggccgtgctttcggtcaaggtgccggaccccaaattctcctcgcagaccaaggac
aagctggtgtcgtcggaagtgcggccggtggtggagagcctcgtcaacgaagcgctcggc
acctggctggaggaacatccggccgaggccaagacgctggtcggcaaggtggtggaagcc
gccgccgcgcgcgaggcggcgcgcaaggcgcgcgaactgacgcggcgcaagggcgtgctc
gacatcacctcgctgcccggcaagctggccgactgccaggagcgcgacccggcgaaatcc
gagatcttcatcgtcgagggcgattccgccggcggctcggccaagggcgggcgctcgcgc
cagaaccaggcgatcctgccgctgcgcggcaagatcctcaatgtcgagcgtgcccgcttc
gaccgcatgctgtcgtcggacatgatcggcacgctgatcaccgcgctcggcacctcgatc
ggcaaggacgagttcaacatcgagaagctgcgctaccacaagatcatcatcatgacggac
gccgacgtggacggcgcgcacatccgcacgctgctgctcaccttcttcttccggcagatg
ccggaggtgatcgagggcggctatctctacatcgcccagccgccgctctacaaagtcagc
cgcggcaagagctcgcaatacctgaaggacgagagtgccttcgaggaatacctgatcgat
tccggcctcgacgaggcgtcgctgacgctgggctcgggcgaggtgcgcgtcggcaacgac
ctgcgcgcggcggtcgaggatgcgctggccgtgcgccagctcatcaacgggctgcacacg
cgctattcccgcgccgtggtggaacaggcggccatcgccggcggcctgaacccggacgtg
ttcagcgatctcggccgcgccaacgcgatggctgagaagatcgccgagcgcctcgacctg
atcgccgaggacaccgagcgcggctggacaggcgcgacctccacctccaacgagggaacg
ggcggctacgtcttcgagcgtacggtgcgcggcgtgcgcgagttcgtggcgctcgacatg
gggctgatcaactccgccgacgcacgcgcgctggaccgctacgcgacccgcctcggcgaa
gtctacggcacgccgccggtgctcaggcgcaaggagaattcggaggtcatcgtcggtccg
ctggcgctgctttccgccgtcttctccaccggcaagaaggggctgaccatgcagcgctac
aaggggctgggcgaaatgaacgccgagcagctctgggaaaccacgctcgacccgaacgtg
cgctcgctcttacaggtcaaggtttccgacgccaccgacgccgattcgctgttcacccgg
ctgatgggcgacgaagtggaaccgcgccgcgagttcatccaggaaaacgcgctgtcggtc
gccaacctggatatctga
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