Mesorhizobium sp. 8: FGU64_21880
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Entry
FGU64_21880 CDS
T07809
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mesr
Mesorhizobium sp. 8
Brite
KEGG Orthology (KO) [BR:
mesr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesr03016
]
FGU64_21880 (truB)
Enzymes [BR:
mesr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FGU64_21880 (truB)
Transfer RNA biogenesis [BR:
mesr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FGU64_21880 (truB)
Prokaryotic type
FGU64_21880 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDC02833
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All DBs
Position
4536774..4537727
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AA seq
317 aa
AA seq
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MSRPRKKKGRPVSGWVILDKPVGMGSTEAVSKIKWLFQAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVQDGAKVYRFTVAWGEERSTDDLEGPVTKSSDRRPLEQDVRAVMPKYTGVI
MQTPPQFSAIKIAGERAYDLAREGETVEIPAREVEIGRLDIVEHSADRTVFEIECGKGTY
VRSLARDMGRDLGCYGHIAELRRTEVDPFTPDDFVTVKELELARFGEAGQPDSGDLPMDF
AAVDDFLIDTVAALDCLPQVAVGDDAATKLRLGNAVIVRGRDAPLEAEEACATARGRLVA
IGAIEHGMFKPKRVFVG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccgcgcaagaagaagggccggcccgtttccggctgggtgatcctcgacaag
ccggtcggcatgggctcgaccgaagccgtctcgaagatcaagtggctgtttcaggccgag
aaggccggccatgccggcacgctcgacccgctggcgtccggcatgctgccgatcgcgctc
ggcgaggcgaccaagacggtgccctacgtgcaggacggcgccaaggtctaccgcttcacg
gtggcctggggcgaggagcgttccaccgacgacctcgaaggcccggtgaccaaaagctcc
gacaggcgcccgttggaacaggacgtccgcgccgtcatgccgaaatacaccggtgtcatc
atgcagacgccgccgcagttctcggccatcaagatcgccggcgagcgcgcctacgacctc
gcccgcgagggcgagacggtggagattcccgcccgcgaggtcgagatcggccggctcgac
atcgtcgagcattccgccgaccgcaccgtcttcgagatcgagtgcggcaagggcacctat
gtgcgctcgctcgcgcgcgacatgggccgcgacctcggctgctacggtcacatcgccgaa
ctgcgccgcaccgaggtcgatccgttcacgccggatgatttcgtcaccgtcaaggaactg
gaactggcgcgcttcggcgaggccggccagcccgacagcggcgacctgccaatggatttc
gccgcggtagacgatttcctcatcgatacggtggcggcgctcgattgcctgccgcaggtc
gccgtcggcgacgacgcggcgaccaagctcaggctcggcaacgccgtcatcgtgcgcggc
cgcgacgcaccgctggaggccgaggaggcctgcgccaccgcgcgcggacgcctcgtcgcc
atcggagccatcgagcacggcatgttcaagccgaaaagggtcttcgtcggctga
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