Mesorhizobium sp. ANAO-SY3R2: ABSY17_00680
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Entry
ABSY17_00680 CDS
T10784
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mess Mesorhizobium sp. ANAO-SY3R2
Pathway
mess03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mess00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABSY17_00680 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mess03019
]
ABSY17_00680 (recQ)
03400 DNA repair and recombination proteins [BR:
mess03400
]
ABSY17_00680 (recQ)
Enzymes [BR:
mess01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABSY17_00680 (recQ)
Messenger RNA biogenesis [BR:
mess03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABSY17_00680 (recQ)
DNA repair and recombination proteins [BR:
mess03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ABSY17_00680 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
XHM74255
LinkDB
All DBs
Position
unnamed3:66906..68705
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AA seq
599 aa
AA seq
DB search
MTATALEILKTVFGYDAFRGPQARIVEHVIAGNNAFVLMPTGGGKSLCYQIPAIVRPGMG
LVVSPLLALMADQVTALRQAGVRAAGLNSDLAPDDRRTLWRDIRAGELDLLYVAPETLLR
PDVLELLDGVKLSLIAIDEAHCLSQWGHDFRPSYRQLDAVVSRFAGTPRMALTATADEPT
RAEILSHLEIDETDAFIAGFDRPNIRYAIEEKDNPRAQLKEFLKRYEGESGIVYCLSKRR
TEETAAWLRGLGYDALAYHAGMDKSAREANQMRFQHGEAVIMVATVAFGMGIDKPDVRFV
AHIDLPGSIEAYYQETGRAGRDGLPSDTLMLYGHEDIALRSRFIEESEAPDQRKRMERQK
LDALLGLAETAGCRRQVLLSYFGDDCEPCGNCDTCSEPPKLFDGAIAAQKALSCIYRTGE
RFGQAYVVDVLLGVENERIAQFGHDRISTFGIGTEHDNRTWRAILRQLIALRFVDVDLAG
HGGLSIAPAGREFLRDKPVLMLRVPAPTRAKRGKVVRSAAQPVVADADNDLFQALRRKRT
EIARLQNVPPYVIFHDKTLIELAAVRPASRTELANVPGVGEAKLERYGPAFLAVIAEHA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgccctcgaaatcctcaagaccgttttcggctatgatgcgttcagggga
ccccaagcgcggatcgtcgagcatgttattgctggcaataacgccttcgtgctgatgccg
acgggcggcggcaaatcgctttgctaccagattcctgcgatcgtccgtcccggcatgggg
ctcgtcgtttcgccgctgctggcgctaatggccgatcaggtgacggcgctgcggcaggca
ggggtgcgcgcggccgggctcaactccgaccttgcgcccgacgatcgccgcaccctgtgg
cgcgacatccgcgccggcgagctcgacctgctctatgtcgcacccgaaaccttgctgcgg
ccggacgtgctggagttgctggacggtgtgaagctgtcgctgatcgccatcgacgaggcg
cactgcctgtcgcaatggggacacgatttccgtccttcctatcgtcagctcgacgcggtc
gtgtcgcgctttgccggcaccccgcggatggcgctgacggcaaccgcagacgagccgacg
cgcgcggaaatcctgtcgcatctcgaaatcgacgagaccgacgcctttatcgccggtttc
gaccggcccaacattcgctacgccatcgaggaaaaggacaatccgcgcgcgcagctcaag
gagttcctcaagcgctacgagggcgagagcggtatcgtctactgcctgtcgaaacgccgg
actgaggaaaccgccgcctggctccggggcctcggctacgatgcgctcgcctatcacgcg
ggcatggacaagtcggcgcgcgaagccaaccagatgcgcttccagcatggcgaggcggtc
atcatggtcgccaccgtcgccttcggcatgggcatcgacaaaccggacgtgcgcttcgtc
gcccatatcgacctgcctggtagcatcgaggcctattatcaggagaccggtcgcgctggg
cgcgacggcctgccgtccgatacgctgatgctctacgggcacgaagatatcgcgctgcgc
agccgtttcatcgaggagtcggaggcgcccgaccagcgcaagcgcatggagcggcagaaa
ctcgatgcgctgctgggactggcagagacggcgggctgccgccgacaagttctgctgtcc
tatttcggcgacgattgcgaaccgtgcggcaattgcgacacctgctcggagccgccaaaa
ttgttcgacggcgccattgcagcgcaaaaggcgttgtcatgcatctaccgcaccggcgag
cgtttcgggcaagcctatgttgtcgacgtgctgctgggcgtggaaaacgagcgcatcgcc
cagttcggccatgaccgcatctccaccttcggcatcggcaccgagcacgacaaccgcacc
tggcgggcgatccttcgccagctgatcgcgctacgcttcgtcgacgtcgacctcgccggc
catggcggcctgtcgatcgcgcccgccggccgcgaattcctgcgcgacaagcctgtgctg
atgctgcgtgtgccggcgccgacgcgcgccaaacgtggcaaggtcgtgcgcagtgcggcg
cagcctgtcgtcgccgatgcggacaacgacctgttccaggcactgcggcggaaacgcacg
gaaatagcgcgcctgcagaacgtgccgccctatgtgattttccacgacaagaccctgatc
gagctggcagcagtgcgacctgcgtcgcgcaccgagttggcgaacgtgccgggtgtcggt
gaagccaagttagaacgctacggccccgccttcctcgcagtgatcgccgagcacgcatga
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