Mesorhizobium sp. ANAO-SY3R2: ABSY17_12340
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Entry
ABSY17_12340 CDS
T10784
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mess Mesorhizobium sp. ANAO-SY3R2
Brite
KEGG Orthology (KO) [BR:
mess00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mess03032
]
ABSY17_12340 (topA)
03400 DNA repair and recombination proteins [BR:
mess03400
]
ABSY17_12340 (topA)
Enzymes [BR:
mess01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABSY17_12340 (topA)
DNA replication proteins [BR:
mess03032
]
Prokaryotic type
DNA Topoisomerases
ABSY17_12340 (topA)
DNA repair and recombination proteins [BR:
mess03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ABSY17_12340 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
XHM78218
LinkDB
All DBs
Position
complement(1571494..1574127)
Genome browser
AA seq
877 aa
AA seq
DB search
MDVVVVESPNKVKSINKYLGRNYKVLASFGHVRDLPAKDGSVKPDEDFAMSWAVDTASAK
RLSDIAKAVKEADGLILATDPDREGEAIAWHVLEVLKQKRVLKDKTIKRVAFNSITKQAV
LEAIANPREIDPPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRFVCDR
EAEIERFVREEYWQIAAILGTPRAENFEARLTVYDGKKLQKLDISSQAMADEIKAMLDGA
SFKALSVEAKPTKRNPSAPFTTSTLQQAASSRLGFSASRTMQVAQRLYEGMEIGGETAGL
ITYMRTDGVQMAPEAIEAAREAIVKEFGARYLPEKPRQYTTKAKNAQEAHEAIRPTDFNR
TPTEMRKYLDADQARLYEMIWKRAIASQMQPAEIERTTVEIEARNGTKTAGLRAVGSVTR
FDGFIAAYTEQKDEDSEDEENRRLPEIRADEALKRETVNASHHTTEPPPRYSEASFIKKM
EELGIGRPSTYVATLKTLEDREYVKIENRKLVPEPKGRLVTAFMESFFENYVEYDFTASL
EEKLDEVSDGKLAWRDVLRDFWKDFSSAVDEIKELRVTDVLDALNEELAPLVFPEREDGS
NPRICPKCGTGNLSLKLGKYGAFVGCSNYPECGFTRQLDGPGGNGENGGLEDGTKVLGTD
PYTSEEITLRSGRFGPYLQRGEGKEAKRSSLPKGWTPASIDHEKALALLALPRDVGAHPE
SGKMISAGLGRYGPFVLHDGTYANLESIEDVFSIGLNRAVTVLAEKQSKGKGGRGGAAAA
ALKELGEHPAGGGNVTVRDGKYGPYVNFGKVNATLPKGKDPATVTMEDALALIAEKEAKG
GGAKKPARAAAKKPAAAKKTASSAAKKPAASKAKKKD
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgttgtcgtcgagtcaccgaacaaggtgaaaagcatcaacaagtatctgggt
cggaactacaaggttctggcctcgttcggccatgtccgcgatctgccggccaaagacggc
tcggtcaagccggacgaagattttgccatgtcctgggctgtcgacaccgcgtcggcgaag
cggctcagcgacatcgccaaggccgtcaaggaagccgacggactgatcctcgcaaccgat
ccggatcgcgaaggtgaagccatcgcctggcacgtgctcgaggtgctgaagcagaagcgc
gtgctcaaggacaagacgatcaagcgcgttgccttcaactcgatcaccaagcaggccgtg
ctcgaagccatcgccaatccgcgtgagatcgacccgccgctggtcgacgcctatctggcg
cgccgcgcgctcgattatctcgtcggcttcacactctcgccggtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtccagtcggtggcgctgcgcttcgtctgcgaccgc
gaagccgagatcgaacgtttcgtccgcgaggaatactggcagatcgcagccattctcggc
acgcctcgggcggagaatttcgaggcccggctcaccgtctacgacggcaagaaactgcag
aagctcgacatttcctcgcaggccatggccgacgagatcaaggcaatgctcgacggcgcg
tccttcaaggcgctgtcggtcgaagccaagccgaccaagcgcaatccgagcgcgcccttc
actacgtcgaccctgcagcaggccgcgtcctcgcgcctcggcttttcggcaagccgcacc
atgcaggtcgcccagcgcctctatgagggtatggagatcggtggcgagaccgccggtctg
atcacctatatgcgtaccgacggcgtgcagatggcgcctgaggctatcgaggccgcgcgc
gaggccatcgtcaaggaatttggcgccaggtacctgcccgaaaagccgcgccaatatacg
accaaggccaagaacgcgcaggaagcgcacgaggccatccgtccgaccgacttcaaccgc
acgccgaccgagatgcgtaagtatctcgatgccgaccaggcccgtctctacgagatgatc
tggaaacgcgcgatcgccagccagatgcagccggccgagatcgagcgcacgaccgtcgag
atcgaggcgcgcaacggcacaaagaccgccggcctgcgcgctgtcggttcggtcacccgc
ttcgacggcttcatcgcagcctataccgagcagaaggacgaggattcggaagacgaggaa
aaccgtcgcctgcccgagatccgcgctgacgaagcgctcaagcgcgagaccgtcaacgct
tcccatcacaccaccgaaccgccgccccgctactccgaggcgagtttcatcaagaagatg
gaagaactcggcatcggtagaccctcgacctatgtcgcgacgctgaagacgcttgaagac
cgcgaatacgtgaagatcgaaaaccgcaagctcgtgcccgagcccaagggccggctcgtc
accgccttcatggagagcttcttcgagaactatgtggagtacgacttcaccgcatcgttg
gaagaaaagctggacgaggtctccgacggcaagctcgcctggcgcgacgtgctgcgtgac
ttctggaaggacttttccagcgctgtcgacgagatcaaggaactgcgcgtcaccgacgtg
ctcgatgcgctgaacgaagaactggctccgctggtcttccccgaacgcgaggacggctcg
aacccgcgcatctgcccgaaatgcggcaccggcaacctgtcgctcaagctcggcaagtat
ggcgccttcgtcggctgctcgaactatcccgaatgcggatttacccgccagctcgatggg
cccggtggcaatggcgagaatggcgggctcgaggacggcaccaaggtgctcggcaccgat
ccctacaccagcgaagagatcaccctgcgcagcggccgcttcggcccctatctccagcgt
ggcgaaggcaaggaagccaagcgctccagcctgcccaagggctggacgccggcgagcatc
gaccacgaaaaggcgctggcactactggcactgccgcgcgacgtcggcgcccaccccgaa
tccggcaagatgatttctgccggtctcggccgctatggcccgttcgtgctgcacgacggc
acctatgccaatctcgaaagcatcgaggatgtgttctcgatcggcctgaaccgcgcggtc
accgtgcttgccgaaaagcagtcgaagggcaagggtggccggggcggtgctgccgccgcg
gctctcaaggagctgggcgagcaccccgccggcggcgggaacgtcaccgtgcgcgacggc
aaatacggcccctatgtcaatttcggcaaggtcaatgctacgctcccgaagggcaaggat
cccgctacggtgacgatggaagatgcgcttgcactgatcgccgaaaaagaggcgaaaggt
ggcggggccaagaagccggcccgcgctgcagccaagaagccggccgcggccaaaaaaact
gccagcagcgccgccaagaagccggccgccagcaaagccaagaagaaggactga
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