Mesorhizobium sp. ANAO-SY3R2: ABSY17_14010
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Entry
ABSY17_14010 CDS
T10784
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mess Mesorhizobium sp. ANAO-SY3R2
Pathway
mess03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mess00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABSY17_14010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mess03021
]
ABSY17_14010
03400 DNA repair and recombination proteins [BR:
mess03400
]
ABSY17_14010
Enzymes [BR:
mess01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABSY17_14010
Transcription machinery [BR:
mess03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABSY17_14010
DNA repair and recombination proteins [BR:
mess03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABSY17_14010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
Motif
Other DBs
NCBI-ProteinID:
XHM78528
LinkDB
All DBs
Position
complement(1913974..1914984)
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIAGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVLAGDIQTVG
DVEILNPDHVICTLDEGAEIRMEFTVDTGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIETDGSISGEDAVAFAARILQDQLALFVNFEEPQKEAAA
EQVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLAAMGLHLGMEVQDWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaactggcaggaactgatcaagccaaacaagatcgagttctcgtcaaag
aagaagacgctgaccacgctggtcgccgagccgcttgagcgcggcttcggtttgacgttg
ggcaacgcgctgcgtcgcgtgctgctctcgtcgctgcgtggtgctgccgttacggccgtc
cagatcgacggcgttctgcacgagttctcctcgatcgcaggcgttcgcgaggacgtgacc
gacatcgtgctcaacatcaaggaaatcgccatccgcatggaaggcgatggtcccaagcgc
atggtcgttcgcaagcagggcccgggtgccgtgctcgctggcgatatccagaccgtgggc
gatgtcgagatcttgaaccccgaccacgtcatctgcaccctcgacgagggcgccgagatc
cgtatggagttcacggtcgataccggcaagggctacgtgcctgccgagcgcaaccgcgcg
gaagatgctccgatcggcctgatcccggtcgacagcctctactcgccggtcaagaaggtt
tcgtacaaggtcgagaacacccgtgagggccaggttctggactacgacaagctgaccatg
accatcgagaccgacggttcgatttcgggtgaggacgctgtggcttttgccgcacgcatc
ctgcaggaccagcttgcgctgttcgtcaacttcgaggagccccagaaggaagccgcggcc
gagcaggtcaccgagctcgccttcaacccggcgctgctcaagaaggtcgacgaactcgag
ctttcggtgcgttcggccaactgcctcaagaacgacaacatcgtatacatcggcgacctc
atccagaagacggaagccgagatgctgcgcacgccgaatttcggccgcaagtcgctcaac
gagatcaaggaagtcctcgccgcaatgggcctgcacctcggtatggaagtgcaggactgg
ccgccggaaaatatcgaagacctcgccaagcgctacgaagatcaatactga
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