Mesorhizobium sp. ANAO-SY3R2: ABSY17_14395
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Entry
ABSY17_14395 CDS
T10784
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mess Mesorhizobium sp. ANAO-SY3R2
Pathway
mess03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mess00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABSY17_14395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mess03019
]
ABSY17_14395
Enzymes [BR:
mess01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABSY17_14395
Messenger RNA biogenesis [BR:
mess03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABSY17_14395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XHM78595
LinkDB
All DBs
Position
complement(1982260..1983663)
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AA seq
467 aa
AA seq
DB search
MTNEIAAEPTGFAKLGITGALLKATHSAGYTEPKPIQVESIPAQLEGRDILGIAQTGSGK
TAAFALPILSKIIALGTKRRPKTARALILAPTRELAVQIEDTIKILAKGAHISTALVLGG
VSRFSQVKKIGPGVDVLIATPGRLTDLVREGDIVLADTQWLVLDEADRMLDMGFINDVKR
IAKATAKFRQTALFSATMPAEIAELAKGLLRDPVRVEVAPQGTTAAEIRQSVVLARTKQK
RKILSDMLADEAMSSVIVFARTKHGADRVTRDLERDGFEAAVIHGNKSQNARQKALNGFR
DGSVRILVATDIAARGIDVPGISHVVNFDLPDEAESYVHRIGRTGRNGADGVAITLVDPS
ENAKLKAVERIIRMKLTIDADHLGQPDPQRPAGEPRFEPANDRGDREERRPQGQRPRGNN
GGRPKGGHGGGERANAGAPKGAKPQGDKPFRGKRRGFGGRKPGTRAA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaatgaaatcgctgcggagccgaccggcttcgccaaactcggcattaccggcgct
ctgctcaaggctacccattcggctggctacacggagcccaaaccgatccaggtcgaatcc
atcccggcgcagctggaaggccgcgacatcctcggcatcgcccagaccgggtcgggcaag
acggcagcctttgccctgccgatcctttccaagatcattgctctcggcaccaagcgccgg
ccgaagactgcgcgtgcgctgatccttgcgccgacgcgtgagcttgcggtgcagatcgaa
gacaccatcaagatcctggccaagggcgcgcacatctcgaccgcgctggttctcggtggc
gtatcgcgcttctcgcaggtcaagaagatcggacctggcgtcgacgtactgattgccacc
ccggggcgtctgacggatctggttcgcgaaggcgacatcgtgctcgccgacactcagtgg
ctggttctcgacgaggccgaccgcatgcttgacatgggcttcatcaacgacgtcaagcgc
atcgccaaggcgactgcgaagttccgccagaccgcacttttctctgcgaccatgccggcc
gagatcgccgaattggccaagggcctgctcagggatcccgtgcgggtcgaggttgctccg
cagggcaccacggcagccgaaatccgccagagcgtcgtgcttgcccgcaccaagcagaag
cgcaagatcctctccgacatgctggccgacgaggccatgagctcggtgatcgtgttcgcg
cgcaccaagcatggcgccgatcgggtcacccgcgatctcgagcgcgacggattcgaggct
gccgtgatccacggcaacaagtcgcagaatgcccgccagaaagcacttaacggcttccgc
gacggttccgtccgtatcctggtcgccactgatatcgccgctcggggcatcgacgttccc
ggtatcagccatgtcgtgaatttcgaccttcctgacgaggccgaaagctacgtccaccgc
atcgggcgcaccggccgcaacggcgccgatggcgtcgcgatcacgctggtcgatccttcg
gagaatgccaagctcaaggctgtcgagcgcatcatccgcatgaagctgacgatcgatgcc
gatcatctcggccaacccgatccgcagcgtcctgctggcgagccgcgcttcgagccggcc
aacgatcgcggtgaccgcgaggagcgtcgtccgcagggacagaggccgcgcggtaataac
ggcggcaggcccaagggcggccacggtggcggtgaacgtgcgaatgccggcgcgcccaag
ggcgccaagccgcagggcgacaagccgttccgcggcaagcgtcgtggcttcggtggtcgc
aagccgggcacgcgcgcagcgtaa
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