Microbacterium esteraromaticum: PTQ19_03005
Help
Entry
PTQ19_03005 CDS
T09665
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mest
Microbacterium esteraromaticum
Pathway
mest03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mest00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PTQ19_03005 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mest03021
]
PTQ19_03005 (rpoC)
03400 DNA repair and recombination proteins [BR:
mest03400
]
PTQ19_03005 (rpoC)
Enzymes [BR:
mest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PTQ19_03005 (rpoC)
Transcription machinery [BR:
mest03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PTQ19_03005 (rpoC)
DNA repair and recombination proteins [BR:
mest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PTQ19_03005 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
WDH79426
LinkDB
All DBs
Position
661761..665636
Genome browser
AA seq
1291 aa
AA seq
DB search
MLDATTFDELRIGLATAEDIRGWSYGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
GCGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHRDLATQENNIRLELKTLGDRRDAKISERMAKLEEE
LAALEAEGAKADAKKKVKDAAEKEMTLTRKGADEAIAKLERVWEDFRTLEVGALRPEDDV
FHELQDRFGQYFEAHMGAEAIQRRLQSFDLKAEADSLHLQISEGKGQRKIRAIKRLKVVN
SFLETGMSPAAMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTR
GEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAAGEGR
AFGSVSEAILARDEGTLDLQAKARIRIPGLTFLEGEAPEGYERHGLVDASLGQAIFNGAL
PKGYPFVRGVADKGKLSQIVNKLAEEYPKVETAATLDRIKDAGFHWATRSGVTVALSDIL
TPPNKAEIVATYEKQAAKVQSQYDKGLTTDAERRQELIKIWTEATDEVQAAMRAHFPDDN
TINRMVTSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGTR
KGLADTALRTADSGYLTRRLVDVSQDVIIREQDCGTSKGLALPIAAPNSQGVLVRDPNVE
NSVFARTLASAVVNEAGEVVAEAGDDVGDVLIDKLVEAGIETIKVRSVLTCDSAVGVCAQ
CYGRSLATGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIEENDKGKKVILTPDNGDEEVVYPVLKRATLLVEDGQHVEV
GQPLQVGTLDPKEVMRVMGAREVQRYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTTLLPGEMVDLKRYQTINREAVTGGQRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLIGLKENVIIGKLIPAGTGLRRYRDITVEATEEAKSERYPNRI
FASDGAYADGDFGYVDFDAFSTDDITPGSYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcaactacattcgatgagcttcgaatcggcctggccaccgctgaagacatt
cgcggctggtcctacggtgaggtcaagaagcccgagacgatcaactaccgcacgctgaag
cccgagaaggacggtctcttcggcgagcagatcttcggcccctcccgcgactgggagtgc
ggctgtggcaagtacaagcgtgtccgcttcaagggcatcgtctgcgagcgctgcggcgtg
gaggtcaccaagagctccgtccgtcgtgagcgcatgggtcacatcgagctggccgccccc
gtgacgcacatctggtacttcaagggtgtgccgtcgcgactgggctacctgctcgacatg
gcgccgaaggaccttgagaaggtcatctacttcgccgcgtacatggtcatctcggtcgac
gaggacgcacgtcaccgcgacctggccacgcaggagaacaacatccggctcgagctgaag
acgctcggcgaccgccgcgacgcgaagatctccgagcgcatggccaagctggaagaggag
ctcgcggcccttgaggccgagggcgccaaggccgacgcgaagaagaaggtcaaggacgcc
gccgagaaggagatgactctcacccgcaagggtgccgacgaggccatcgccaagctcgag
cgcgtgtgggaggacttccgcacgctcgaggtcggcgcgctgcgccccgaggacgacgtc
ttccacgagctgcaggaccgcttcggtcagtacttcgaggcccacatgggcgccgaggcg
atccagcgccgcctgcagagcttcgacctaaaggccgaggcagacagcctgcacctgcag
atctctgagggcaagggccagcgcaagatccgtgcgatcaagcgcctgaaggtcgtcaac
tcgttcctcgagaccggcatgagcccggccgcgatggtgctcgacgtcgttccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgaccagcgacctg
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgtctgcgtcgtctgatcgacctc
ggtgctcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggtcgccccgtcaccggtaccggcaaccgcgccctgaag
tccctcagcgacatgctgaagggtaagcagggtcgtttccgtcagaacctgctcggtaag
cgtgtcgactactcgggccgttcggtcatcgtcgtcggtccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggccctggagctgttcaagccgttcgtgatcaagcgtctg
atcgacctgggtcactcgcagaacatcaaggcggccaagcgtgccgtcgagcgcacccgc
ggcgaggtctgggacgttctcgaagagatcatccgcgagcgccccgtgctgctgaaccgt
gcacctacgctgcaccgtctcggcatccaggcgttcgagccgcagctggtcgagggtaag
gccatccagctgcacccgctcgtctgcgcggccttcaacgccgacttcgacggtgaccag
atggctgtgcacctgccgctgtcggtcgaggcgcaggccgaggcccgcgtgctgatgctc
gcctcgaacaacatcctcaagccgtcggacggccgtccggtgaccctgccttcgcaggac
atgatcatcggtctgcaccacctgaccacggtcaaggagggcgcagccggtgagggtcgt
gcgttcggctcggtctccgaggcgatcctggcccgcgacgagggcacgctcgacctgcag
gccaaggcgcgcatccgcatccccggtctcaccttcctcgagggtgaggctcccgagggc
tacgagcgtcacggcctcgtcgacgcctcgctcggtcaggcgatcttcaacggcgcgctt
ccgaagggttaccccttcgtgcgcggcgtcgccgacaagggcaagctgtcgcagatcgtg
aacaagctggccgaggagtacccgaaggtcgagacggccgccacgctggaccgcatcaag
gatgccggtttccactgggcgacccgctcgggcgtcacggtcgcgctgagcgacatcctc
accccgccgaacaaggctgagatcgttgcgacctacgagaagcaggccgcgaaggtccag
tcgcagtacgacaagggtctgaccaccgatgctgagcgccgtcaggagctcatcaagatc
tggaccgaggcgaccgacgaggtgcaggccgcgatgcgcgcgcacttcccggacgacaac
accatcaaccgcatggtgacctcgggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgtggtctggtgaacaaccccaagggtgagatcatcccgcgtccgatcatc
tcctcgtaccgcgagggtctgtcggtggcggagtacttcatcgcgacgcacggtacccgt
aagggtctggccgacaccgctctgcgtaccgccgactcgggttacctgacccgtcgtctg
gtggacgtgtcgcaggacgtcatcatccgcgagcaggactgtggcacgtcgaagggcctc
gccctgccgatcgccgcaccgaactcgcagggtgtgctggtccgcgacccgaacgtcgaa
aactcggtgttcgctcgcacgctggcatccgctgtggtcaacgaggcaggcgaggtcgtc
gccgaagccggtgacgacgtgggcgacgtgctcatcgacaagctggtcgaggccggtatc
gagaccatcaaggtgcgctcggtgctgacctgcgactcggccgtcggtgtctgcgcgcag
tgctacggccgttcgctcgcgaccggtaagacggtcgacatcggtgaggcggtcggcatc
atcgcggcgcagtcgatcggtgagcccggtacccagctgacgatgcgtacgttccacacc
ggtggttcggcatcggctgatgacatcacccagggtctgccccgtgtgcaggagctcttc
gaggctcgtacgcccaagggtgcctctccgatcgctgaggccgacggccgcatcacgatc
gaagagaacgacaagggcaagaaggtcatcctcacgcccgacaacggtgacgaggaagtg
gtctacccggtgctgaagcgtgcgacgcttctcgtcgaggacggccagcacgtcgaggtc
ggtcagcccctgcaggtcggaacgctcgaccccaaggaggtcatgcgcgtcatgggtgcc
cgcgaggtgcagcgttacctcgtcaacggcgtccagggtgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcgtaaggtcaccgtg
gtcgaccacggcgacaccacgctgctgccgggtgagatggtcgacctgaagcgctaccag
acgatcaaccgcgaggccgtgaccggtggtcagcgccccgcatcgggtcgtcccgagctg
atgggtatcacgaaggcgtcgctcgcgaccgagtcgtggctgtcggccgcatcgttccag
gagacgacccgcgtgctcacgcaggccgccatggagggcaagagcgacccgctgatcggt
ctcaaggagaacgtcatcatcggtaagctcatccccgccggaaccggtctgcgtcgctac
cgcgacatcacggtcgaggcaacggaagaggccaagagcgagcgctacccgaaccggatc
ttcgcatccgacggtgcgtacgccgacggtgacttcggttacgtcgacttcgacgcgttc
tcgacggacgacatcacgcccggctcgtacaactga
DBGET
integrated database retrieval system
