Microbacterium esteraromaticum: PTQ19_04225
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Entry
PTQ19_04225 CDS
T09665
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mest
Microbacterium esteraromaticum
Pathway
mest03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PTQ19_04225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mest03400
]
PTQ19_04225
Enzymes [BR:
mest01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
PTQ19_04225
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PTQ19_04225
DNA repair and recombination proteins [BR:
mest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PTQ19_04225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_TFIIB
DUF512
Motif
Other DBs
NCBI-ProteinID:
WDH79661
LinkDB
All DBs
Position
complement(938353..939216)
Genome browser
AA seq
287 aa
AA seq
DB search
MPEMPEVQGLVDFLGERAAGRVITRASVSAIAALKTFDPPITALQGATITGAARHGKFID
LALGDQLHLVVHLAKAGWLRWYENLPTTLIKPGKSPIALRIALDDGSGFDLTEAGTKKSL
AISVVRDPLDVPGIARLGPDPLDPAFTREAFAAVLAGRRTQIKGLLRDQGLIAGIGNAYS
DEILHAAKMSPYAPAANLDDADVDRLYEAMQTTLRTAIDEAAGKPPADLKDAKRSGFRVH
ARRGQACPVCADEVRSVFFADRSLEYCPTCQTGGKVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaatgccggaggtgcagggactggtcgacttcctcggtgagcgcgccgcgggg
cgagtgatcacgcgcgcgagcgtctcggcgatcgccgcgctgaagaccttcgacccaccg
atcacggcgctgcagggcgccacgatcacgggcgctgcccggcatggcaagttcatcgac
ctcgcactcggcgatcagctgcaccttgtcgtgcatctggcgaaggcgggctggctgcgg
tggtacgagaacctgcctacgactctcatcaagccgggcaagagtccgatagccctgcgc
atcgcactcgacgacggcagcgggttcgatctgaccgaggcgggcaccaagaagtcgctc
gccatctcggtggtgcgcgatccgctcgatgtgcccggtatcgcgcgcctgggccccgac
ccgctcgacccggcattcacgcgggaggcgttcgcggccgtgttggccggccgccgtacg
cagatcaaggggctgctgcgcgatcagggtctgatcgcgggcatcggcaatgcctacagc
gatgagattctgcacgccgcgaagatgtcgccgtacgcacccgcggcgaacctggacgac
gccgatgtcgatcggctgtacgaggcgatgcagaccactctgcgcacggcgatcgacgag
gccgcaggaaagcccccggccgatctgaaggatgcgaagcggtcgggcttccgggtgcac
gcacgacgggggcaggcctgccctgtctgcgccgacgaggtgcgcagtgtgttcttcgcc
gatcgcagcctggagtactgcccgacgtgccagacgggaggcaaagtgctcgccgaccgg
cgcctgtcgcggctgttgaaatga
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