Microbacterium esteraromaticum: PTQ19_06890
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Entry
PTQ19_06890 CDS
T09665
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mest
Microbacterium esteraromaticum
Pathway
mest03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mest00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTQ19_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mest03019
]
PTQ19_06890
03009 Ribosome biogenesis [BR:
mest03009
]
PTQ19_06890
Enzymes [BR:
mest01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PTQ19_06890
Messenger RNA biogenesis [BR:
mest03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PTQ19_06890
Ribosome biogenesis [BR:
mest03009
]
Prokaryotic type
rRNA helicases
PTQ19_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
UvrA_inter
HEM4
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WDH80318
LinkDB
All DBs
Position
complement(1500060..1501991)
Genome browser
AA seq
643 aa
AA seq
DB search
MPAPDSSTDSGEAVAEQSSTPGFDDLGISGPVLGAIRELGYETPSPIQAATIPLLLQGRD
VLGTAQTGTGKTAAFALPVLENLDLAQKTPQALVLAPTRELALQVCEAFESYASRMKGVH
VLPVYGGQGYGVQLSALRRGVHIVVGTPGRIMDHQAKGTLDLSELKYLVLDEADEMLKMG
FAEDVEQILAQTPSDKQVALFSATMPPAIRRLAQQYLNAPEEVAIKGKTSTNQNITQRYL
VVSYAQKVDALTRILEVENFDGMIVFVRTKNETETLAEKLRARGYSAAAINGDVPQVQRE
RSVNQLKDGKLDILVATDVAARGLDVERISHVVNFDIPTDTESYVHRIGRTGRAGRSGDA
ISFITPRERYLLKHIEKATRQQPAQMQLPTTEDVNTTRLARFDDAITAALGETARIEGFR
DIIAHYVRNNDVPEADVAAALAVVAQGETPLLLDPADDALAKSVERDNRPPRERQERSDR
APRERRGRGDYTPYRIEVGRRHRVEPRQIVGALANEGGLGRDDFGAIAIKPDFSIVELPV
TMSPAVLDKLRDTRISGKLIEIKPDRGVPSRRAPRDDRRGGYQGSRDRGGYQRDDRSGRD
DRGYQRDDRGGRDDRGYQRDDRGGRGRDFRDEGGTRKPRHKKD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcccccgactcctccaccgactccggagaggccgtcgccgagcagtcgtcgacg
cccggcttcgatgacctcggcatcagtggcccggtgctcggcgccatccgcgaactgggc
tatgagacgccctctcccattcaggcggcgacgattccgctgctgttgcagggccgcgac
gtgctcggcaccgcgcagaccggcaccggcaagacggccgcgttcgcactacctgtgctc
gagaacctcgatctggcgcagaagaccccgcaggcgctggtgctcgcacccacgcgagaa
ctggcgctgcaggtgtgtgaggcgttcgagtcgtacgcgtcccgcatgaagggcgttcat
gtgctgccggtgtacggcggtcagggttacggcgtgcagttgtcggccttgcgtcgcggc
gtccacatcgtcgtcggcactcctgggcgcatcatggatcaccaggccaagggaacgctc
gacctgtcggagctgaagtacctggtgctcgacgaagccgacgagatgctcaagatgggc
tttgccgaagacgtcgagcagatcctcgcgcagaccccgagcgataagcaggtcgcgctg
ttctcggcgacgatgcctccggcgatccgccgactcgctcagcagtacctcaacgcgccc
gaagaagttgccatcaagggcaagaccagcacgaaccagaacatcacgcagcgctacctg
gtggtgtcgtacgcgcagaaggtggatgccctcacgcgcatcctcgaggtcgagaacttc
gacggcatgatcgtgttcgtccgcaccaagaacgagaccgagacgctcgctgagaagctg
cgtgcccgcgggtattcggcggcggccatcaacggcgacgttccgcaggtgcagcgcgag
cgttcggtgaaccagctcaaggacggcaagctcgacattctcgtcgccactgacgtcgcg
gcccgtggtcttgacgtggagcgcatcagccatgtggtgaacttcgacattcccaccgac
accgagtcgtacgtgcaccgcatcggacgcactggccgtgccggccggtcgggtgatgcg
atcagcttcatcacgccgcgtgaacgctatctgctcaagcacattgagaaggcgacccgt
cagcagcccgcccagatgcaactgccaacgaccgaagacgtcaacaccacacgcctggcc
cgcttcgatgatgcgatcactgctgcgctcggcgagacggcgcgtatcgaaggcttccgc
gacatcatcgcgcactatgtgcgcaataacgatgtgcccgaggctgatgtggctgcggct
ctcgccgtcgtggcacagggcgaaacgccgttgctcctggatccggccgacgacgcactg
gcgaagtcggttgaacgggacaaccgtcctccgcgtgaacggcaggagcgttcggaccgt
gctccacgtgagcgtcgcgggcggggcgactacacgccgtaccgcatcgaggtcgggcgc
cgccaccgggtggagccgcgacagatcgtcggagcactcgcgaacgagggcggcctggga
cgcgatgacttcggtgccattgcgatcaagcccgacttctcaattgttgaacttcctgtg
acgatgagccccgctgtgctggacaagctgcgcgacacccgtatctcggggaagctgatc
gagatcaagcccgaccgcggagtgccgagccggcgtgcgccgcgcgacgaccgccgcggc
ggctaccagggatcgcgtgatcgtgggggctaccagcgggacgaccgcagcgggcgcgac
gaccgcggataccagcgggacgaccgtggcgggcgcgacgaccgcggataccagcgggac
gaccgtggcgggcgcggtcgcgacttccgcgatgaaggcggcacccgcaagccgcgccac
aagaaggactga
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