Microbacterium esteraromaticum: PTQ19_09020
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Entry
PTQ19_09020 CDS
T09665
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mest
Microbacterium esteraromaticum
Pathway
mest03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mest00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTQ19_09020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mest03019
]
PTQ19_09020
03009 Ribosome biogenesis [BR:
mest03009
]
PTQ19_09020
Enzymes [BR:
mest01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
PTQ19_09020
Messenger RNA biogenesis [BR:
mest03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PTQ19_09020
Ribosome biogenesis [BR:
mest03009
]
Prokaryotic type
rRNA processing factors
PTQ19_09020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Rootletin
Motif
Other DBs
NCBI-ProteinID:
WDH77669
LinkDB
All DBs
Position
complement(1915270..1917564)
Genome browser
AA seq
764 aa
AA seq
DB search
MAEENDDKNTPTLDTTPAQPVVEGTAVEASAHAEVVTDPLKVVPDEEAAPVASEPAEPEE
PKPVTAVSLGLIPEVFVSRVSTQLHFHAPQITALPARPRRDDVDEDDRGPGGSRRGRRRR
GSEGDDGHEEPRQRQRAVEYITEPKAIKGSTRLEAKKQRRRDGRDAGRRRAVVTEAEFLA
RRESVDRMMVVRAKNGRTQIGVLEDDVLVEHYVARNQDASLIGNVYLGRVQNVLPSMEAA
FVDIGRGRNAVLYSGEVDWDGVQTGNQPRRIELALKPGDRVLVQVTKDPVGHKGARLTSQ
ISLPGRYLVYVPGGSMNGISRKLPDNERARLKRILKEVLPESSGVIVRTAAEGATEEQLT
RDVQRLTSQWEHIQKQVASQQAPALLHAEPDLLVKIVRDVFNEDFTRMVIHGDDAQRTIR
AYLESVAPDLLERVETYTDEVDPFDAYRITEQIEKALDRKVWLPSGGSLVIDRTEAMTVV
DVNTGKFVGSGGNLEETVTKNNLEAAEEIVRQLRLRDIGGIIVVDFIDMVLESNRDLVLR
RLVECLSRDRTKHQVAEVTSLGLVQMTRKKLGLGLLETFSEACEVCAGRGVIVHHDPVVK
HRGGGSNGGQGRRPRGGSQSSSQQQNQNQSQNQQQASQPAAANGGTHSITEGAKSALAAI
AASTIAPTADAPTTDAAVADEKPAAEPAAERPKKPRKKRNTERKAPRSEAEQLLDSVLDA
LPEPKAPGQGRNRRRVTTAMLTPGSASASGSEQSTPVPGADAQS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagagaacgatgacaagaacacccctaccctcgacacgacgccggctcagccg
gtagtcgagggcaccgcagtcgaggcatcggctcacgccgaggtcgtgacggatccgctg
aaggtggttcccgacgaggaggccgcaccggtggcatccgagcccgcagagcccgaggaa
cccaagccggtgacggcggtgagcctgggcttgatccccgaggtgttcgtctcgcgggtg
tccacccaactgcacttccacgccccgcagatcacggcgctgccggcccgtcctcggcgc
gacgacgtcgacgaagacgatcgcggcccgggaggatcccgccgcggacgtcgtcgtcgc
ggatccgagggtgacgacggtcacgaggagccgcgtcagcgccagcgcgcggtcgagtac
atcaccgagccgaaggcgatcaagggctccacgcgcctcgaggccaaaaagcagcgccgt
cgtgacggccgagacgccggtcggcggcgcgctgtggtgaccgaggcggagttcctcgcg
cgtcgggagtccgtcgaccgcatgatggtcgtgcgcgccaagaacggacgcacgcagatc
ggcgtgctcgaggacgacgtgctcgtggagcactatgtcgcacgcaatcaggacgcgtcg
ctgatcggcaacgtgtacctcgggcgcgtgcagaacgtgctgcccagcatggaggcggca
ttcgtcgacatcggccgcggtcgaaacgccgtcctgtactcgggcgaggtcgactgggac
ggtgtccagaccggcaaccagccgcgccgcatcgagctcgcgctcaagcccggcgaccgg
gtgctcgttcaggtcacgaaggaccccgtcgggcacaagggtgctcgcctgaccagccag
atctccctgccgggacgctacctggtgtacgtccccggtggatcgatgaacggcatctcg
cgcaagctgcccgacaacgagcgcgcgcgcctcaagcgcatcctcaaagaggtgctgccc
gagtcgtccggtgtcatcgttcgcaccgctgccgagggggcgaccgaggagcagctgacc
cgcgacgttcagcgcctcacctcgcagtgggagcacattcagaagcaggtcgcctcgcag
caggcgccggcgctgctgcacgccgagcccgacctgctcgtcaagatcgtccgtgacgtc
ttcaacgaggacttcacccgcatggtgatccacggcgatgacgcacagcgcaccatccgc
gcctacctcgagagcgtcgcccccgacctgctcgagcgcgtcgagacctacaccgacgag
gtcgacccgttcgacgcgtaccgcatcaccgagcagatcgagaaggcgctcgaccgcaag
gtctggctgccctcgggtggctcgctggtgatcgaccgcaccgaggcgatgaccgtcgtc
gacgtcaacacgggaaagttcgtcggctcggggggaaacctcgaagagaccgtcaccaag
aacaacctcgaagcggctgaggagatcgtccgacagctgcgtctgcgcgacatcggcggc
atcatcgtcgtcgacttcatcgacatggtgctcgagtccaaccgcgacctcgtgctgcgc
cgcctggtcgagtgcctgagccgtgaccgcaccaagcaccaggtcgccgaggtgacctcg
ctggggctggtgcagatgacgcgcaagaagctgggcctcggactgctggagaccttcagc
gaggcgtgtgaggtgtgcgccggtcgcggcgtgatcgtgcatcacgacccggttgtcaag
caccgtggtggtggatcgaatggcggccagggccgtcgtccgcgcggcggatcgcagtcc
tcctcgcagcagcagaaccagaatcagagccagaaccagcagcaggcctcgcagcccgcg
gcggccaacggtggcacccacagcatcaccgaaggcgccaagtcggctcttgcggcgatt
gccgcatccaccatcgcaccgacggcggacgcaccgacgacggacgctgccgtggccgat
gagaagcctgcggctgagccggctgccgagcggccgaagaagccgcgcaagaagcgcaac
accgagcgcaaggccccgcgcagcgaggccgagcaactgctcgactcggtgctcgatgcg
cttccggaacccaaggccccggggcaggggcgcaaccgtcgtcgtgtgacgaccgcgatg
ctgacgcctgggtcggcatccgcctcgggctcagagcagtcgacgccggtcccgggcgcg
gacgcgcagtcctga
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