Microbacterium esteraromaticum: PTQ19_09370
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Entry
PTQ19_09370 CDS
T09665
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mest
Microbacterium esteraromaticum
Pathway
mest03030
DNA replication
mest03430
Mismatch repair
mest03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mest00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTQ19_09370 (dnaE)
03430 Mismatch repair
PTQ19_09370 (dnaE)
03440 Homologous recombination
PTQ19_09370 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mest03032
]
PTQ19_09370 (dnaE)
03400 DNA repair and recombination proteins [BR:
mest03400
]
PTQ19_09370 (dnaE)
Enzymes [BR:
mest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTQ19_09370 (dnaE)
DNA replication proteins [BR:
mest03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTQ19_09370 (dnaE)
DNA repair and recombination proteins [BR:
mest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTQ19_09370 (dnaE)
BRITE hierarchy
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WDH77734
LinkDB
All DBs
Position
complement(1991281..1994799)
Genome browser
AA seq
1172 aa
AA seq
DB search
MASDSFVHLHVHSEYSMLDGAAKLASMTQAAADYGMPAIAVTDHGNTFAAFEFYNAAKSA
GVKPIIGLEAYVTPGTHRSDKSRVAWGSPDQKSDDVSGSGAYTHTTLWAENTAGMHNLFR
LSSLSSIEGYYFKPRMDRELLQTYGKGLIATTGCPSGEIQTRLRLGQYDAARAAAAEFQD
IYGKDNYFVEIMDHGLDIERRVITDLLRISKDLGIPLVATNDSHYTHQHEADAHEALLCV
QSGSTMDDPNRFKFNGDGYYIKTAQEMRQLFRDHPEACDNTLLIAERCNVEFDTSANYMP
RFPVPDGETEESWLVKEVEAGLHYRYPNGISDAVRQRAEYETGIILQMGFPGYFLVVADF
INWAKDNGIRVGPGRGSGAGSMVAYAMRITDLDPIEHGLIFERFLNPDRVSMPDFDVDFD
DRRRGEVIDYVTEKYGSERVAQIVTYGTIKSKQALKDAGRVLGFPFSMGERLTKAMPPPV
MGKDMPLSGMYDSAHPRYKEASEFRALIDTDPEAKTVFDRALGLEGLKRQWGVHAAGVIM
SSEPLLDIIPIMKREQDGQIVTQFDYPSCEALGLIKMDFLGLRNLTIISDALDNIRMNRG
EEIDLEQLTLDDRGAYDLLARGDSLGVFQLDGGPMRSLMRLMRPDSFEDISALIALYRPG
PMGANSHTNYALRKNGQQPITPIHPEFVESLADILEESYGLIIYQEQVMAIAQRVAGFSL
GQADILRRAMGKKKKSELDKQFEGFHAGMRANGYSDEAVNALWEILLPFSDYAFNKAHSA
AYGVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMALYLNECRRMGIRVLPPDVSESINF
FAAVGEDIRFGLGAVRNVGSNVVDGIVGAREEGPYTSFHDFLNRVPMHVSNKRTVESLIK
AGAFDSMGDTRRALVEIHEDAVEAAVDRKRNEAQGAIGFDFDSLYDDIEGAPPAKVPERP
EWIKKDKLAFEREMLGLYVSDHPLAGLEVPLAKHASISIHDLLNSEDMQDGDQVTVAGLV
TSVQHRVAKASGNPYGMITVEDFNGEVTVMFMGKTYTEFQHTLQQDAILAVRGRVSRRDD
GLNLHAQSTFTPDVGSFDAAGPLSLLVAEQRATERVMNDLAMVLQRHAGETEVLLRVHRG
GTAKVFEVPMPVKISADLFGDLKSLLGPTCLG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgattccttcgtgcacctgcatgtccacagcgagtactcgatgctggacggt
gccgcgaagctcgcctcgatgacccaggccgccgccgactacggcatgcccgcgatcgcg
gtgaccgaccacgggaacaccttcgccgcgttcgagttctacaacgcggccaagtccgcc
ggcgtcaagccgatcatcgggctcgaggcgtacgtcaccccgggcacgcaccgcagcgac
aagtcgcgcgtcgcgtggggttcccccgaccagaagagcgatgacgtctcgggctccggc
gcgtacacgcacaccacgctgtgggcggagaacaccgccgggatgcacaacctcttccgt
ctcagctccctttcgagcatcgaggggtattacttcaagccgcgcatggatcgcgagctg
ctccagacctacggcaaagggctgatcgccaccacgggctgcccgtccggtgagatccag
acccgattgcgtctgggacagtacgatgcggcccgcgccgcggccgcggagttccaagac
atctacggcaaagacaactacttcgtcgagatcatggaccatgggctcgacatcgaacgc
cgcgtcatcacggatctgctgcggatttcgaaggatctcggaatcccgctggttgcgacc
aatgactcgcactacacccatcagcacgaggccgatgcccatgaagcgttgctgtgtgtg
caatccggctcgacgatggacgaccccaaccggttcaagttcaacggtgacggctactac
atcaagacggcgcaagagatgcgccagctgttccgcgaccaccctgaggcgtgcgacaac
acgctgctgatcgccgaacgctgcaatgtcgagttcgacacctcggccaactacatgccg
cgcttccccgttcccgacggtgagaccgaggaaagctggctggtcaaggaggtcgaggcg
ggtctgcactaccgctacccgaacggcatctcagacgccgtgcgccagcgtgccgagtac
gagaccggcatcatcctgcagatggggtttccgggctacttcctggtcgtcgcggacttc
atcaactgggccaaggacaatggcattcgtgtgggcccggggcgtggctcgggagccgga
tccatggtcgcctacgcgatgaggatcaccgacctcgaccccatcgagcacgggctgatc
ttcgaacggttcctcaatcccgaccgtgtctcgatgcccgacttcgacgtcgactttgac
gaccgccgacgcggcgaggtcatcgactacgtcaccgagaagtacggttccgagcgcgtg
gcgcagatcgtcacctacggaaccatcaaatcgaagcaggctctcaaggatgccggtcga
gtgctgggctttccgttcagcatgggggagcgtctgaccaaggcgatgcccccgcccgtg
atgggcaaggacatgccgctgagcggcatgtacgacagcgcgcacccgaggtacaaggaa
gccagcgagttccgcgcgctgattgacaccgaccccgaggccaagaccgtcttcgaccgc
gcactcgggctggaaggcctcaaacgacagtggggtgtgcacgccgccggtgtgatcatg
tcgtccgagccgctgctcgacatcatcccgatcatgaagcgcgagcaggacggccagatc
gtcacccagttcgactacccgtcgtgcgaggcgctcgggctgatcaagatggacttcctc
gggctgcgcaacctgacgatcatctcggacgcgctcgacaacatccgcatgaaccgcggc
gaagagatcgacctcgaacaactcaccctcgatgaccgcggtgcctacgatctgctagct
cgaggcgactcactcggcgtcttccagctcgacggtggcccgatgcgttcgctgatgcgg
ctgatgcgccccgacagcttcgaggacatctcggcactcatcgcgctgtaccgcccgggg
ccgatgggagcgaactcgcacacgaactacgcgctccgcaagaacgggcagcagccgatc
acccccatccacccggagttcgtcgaatcactcgccgacatcctggaagagtcctacggc
ctcatcatctaccaggagcaggtgatggccatcgcccagcgcgttgccgggttctctctc
ggccaagcagacattctgcgccgcgcgatgggcaagaagaagaaatccgagctcgacaag
cagttcgagggcttccacgccggcatgcgggccaacgggtactcggacgaggccgtcaac
gcgctgtgggagatcctgctgccgttctcggactacgccttcaacaaagcacactccgcc
gcgtacggcgtcgtgtcgtactggacggcctacctgaaggctcactacccggccgagtac
atggcggcactgctgaccagcgtcggcgactccaaggacaagatggcgctctacctcaac
gagtgccgccgcatgggcatccgcgtgctgccccccgacgtgtcggaatcgatcaacttc
ttcgccgccgtcggggaggacatccgcttcgggctcggtgccgtgcgcaacgtcggcagc
aacgtcgtcgacggcatcgtcggcgcgcgcgaggaggggccgtacacgtcgttccacgat
ttcctgaaccgtgtgccgatgcatgtgtcgaacaagcgcactgtcgagtcgttgatcaag
gccggcgccttcgactcgatgggcgatacgcggcgcgcgctcgtcgagatccacgaggat
gccgttgaggctgctgtcgaccgcaagcgcaacgaggcccagggggcgatcggcttcgac
ttcgacagcctgtacgacgacatcgagggtgcgccgccggccaaagtgccggagcgtccc
gagtggatcaagaaggacaagctcgccttcgagcgcgagatgctcggactgtacgtgtcg
gatcacccgctcgcgggtctcgaggtgccgctggccaagcacgcctcgatctcgatccac
gacctgctcaactcggaggacatgcaggacggtgatcaggtcaccgtcgcgggcctcgtc
accagcgtgcagcaccgggtggccaaagccagcggaaacccctacggcatgatcaccgtc
gaggacttcaacggcgaggtgacggtcatgttcatgggcaagacctacaccgagttccag
cacacgctgcagcaggacgcgattctcgccgtgcgcggacgggtctcgcgccgcgacgac
gggctcaacctgcacgcgcagtcgacgttcacaccggacgtcggctcgttcgatgctgcg
ggaccgctctctttgctggtcgccgagcagcgggccaccgagcgcgtgatgaacgacctc
gcgatggtgctgcaacgccacgctggtgaaaccgaggtgctgctgcgcgtgcaccggggc
ggtactgcgaaggtgttcgaggtgccgatgcccgtgaagatctcggccgacctgttcggc
gatctcaagtcgttgctcggaccgacctgtctgggatga
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