Microbacterium esteraromaticum: PTQ19_12490
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Entry
PTQ19_12490 CDS
T09665
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mest
Microbacterium esteraromaticum
Pathway
mest03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mest00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PTQ19_12490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mest03021
]
PTQ19_12490
03400 DNA repair and recombination proteins [BR:
mest03400
]
PTQ19_12490
Enzymes [BR:
mest01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PTQ19_12490
Transcription machinery [BR:
mest03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PTQ19_12490
DNA repair and recombination proteins [BR:
mest03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PTQ19_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
WDH78325
LinkDB
All DBs
Position
complement(2601507..2602496)
Genome browser
AA seq
329 aa
AA seq
DB search
MLIAQRPTLTEEKISENRSRFVIEPLEPGFGYTIGNALRRSLLSSIPGASVTTIRIDGVL
HEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHN
PELVIATLNDTARFELELTIERGRGYVSAAQNRSEYAEAGQIPIDSIYSPVLKVSYRVDA
TRAGERTDFDKLVLDVETKSAISARDAVASAAKTLTELFGLARELNTEAEGIEIGPAPVE
AVLSSELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LVSLGLSLKDSVPGFDGAHFYSAGEDESF
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatcgcacagcgtcccactctcaccgaggaaaagatctccgagaaccgcagccgg
ttcgtcatcgagccgctggagcccgggttcggatacacgatcggcaacgcgctgcgtcgc
agcctgctgtcgtcgatccccggcgcatcggtcaccaccattcgcatcgacggcgtgctg
cacgagttcagcacgatccccggtgtgaaggaggatgtcaccgagatcatcctgaacatc
aagcagctggtcgtttccagcgagcgcgacgagcccatcaccgcgtacctgcgcaagacg
ggcgccggcgaggtcaccgccgctgacatctccgctccggcgggtgtcgaggtgcacaac
cccgagctggtcatcgcgacgctcaacgacaccgctcgcttcgagctcgagctcaccatc
gagcgtggccgcggctacgtctcggctgcgcagaaccgcagcgagtacgccgaggccggc
cagatcccgatcgactcgatctactcgccggtgctcaaggtcagctaccgcgtcgacgcc
acccgtgccggtgagcgcaccgacttcgacaagctggtgctcgatgtcgagacgaagtcg
gcgatcagcgcgcgcgacgccgttgcatcggccgcgaagaccctcaccgagctgttcggt
ctcgctcgcgagctgaacaccgaagcagagggcatcgagatcggccccgcgccggtcgag
gccgtgctctccagcgagctctccatgccgatcgaggacctcgatctgtcggtgcgctcg
tacaactgcctcaagcgtgagggcatcaacaccgtttcggagctggtcgccctttcggag
acgcagctgatgaacatccgcaatttcggacagaagtcggtcgacgaggtgcgcgacaag
ctcgtctcgctcggtctgtcgctgaaggattcggtgcccggtttcgacggcgcccacttc
tacagcgcaggcgaagacgagtccttctga
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