KEGG   Microbacterium esteraromaticum: PTQ19_12860
Entry
PTQ19_12860       CDS       T09665                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
mest  Microbacterium esteraromaticum
Brite
KEGG Orthology (KO) [BR:mest00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mest03400]
    PTQ19_12860
Enzymes [BR:mest01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PTQ19_12860
    5.6.2.6  RNA 3'-5' helicase
     PTQ19_12860
DNA repair and recombination proteins [BR:mest03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PTQ19_12860
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr WH4_Lhr DEAD WH2_Lhr Helicase_C ResIII DUF6406 PhoH
Other DBs
NCBI-ProteinID: WDH78397
LinkDB
Position
2664201..2668892
AA seq 1563 aa
MSSVLDRFTPATQEWFRGAFDAPTPAQQGAWEAVSADRSALVVAPTGSGKTLSAFLWAID
SVFRERMAESDAIDAAARTRILYISPLKALGVDVERNLRSPLVGIGQSARRLGLDVPEIS
VGVRSGDTTAADRRRLVSAPPDILITTPESLYLMLTSRAGETLRGVHTVIIDEVHAVAST
KRGAHLAVSLERLDALRAAHGADRPAQRIGLSATVRPIDEVARFLGGSAPVEIVAPPASK
TFELDVVVPLDDMRNPPPPPGAATGGGAVSADAAGDDAVLTEVTGSVWPHVEEAIVDRVL
QNRSTIVFANSRRLAERLTGRLNEIYAERHEIALAAPGAPPAAMIAQGGQTAGAPPVLAK
AHHGSVSKEQRAQVEDELKSGVLRCAVATSSLELGIDMGAVDLVIQVEAPPSAASGLQRV
GRAGHQVGEISRAALFPKHRGDVLHTAIVTERMLAGRIEAITVPRNPLDILAQQTIAACA
LDPISVEDWFETVRRSAPFQTLPRSAYEATLDLLAGRFPSDEFAELRPRLVWDRDAGTLT
GRPGAQRIAVTSGGTIPDRGLFGVFVSGESTGARVGELDEEMVYESRVGDVFTLGTTSWR
IAEITHDRVNVLPAYGQPGRVPFWHGDGIGRPFELGQALGRFSREVSTASPDDAERRLVA
AGLDANARANLLGHLAEQREATGTLPTDRALTVERGHDEVGDWRLILHSPYGMKVHAPWA
LAVNARVRERLGVEGSAVASDDGIIVRIPDAESEPPGADLFVFDPDELEQLVTAEVGGSA
LFASRFRECAARALLMPRMNPNKRTPLWQQRQRSAQLLEVARRHPTFPIILETLREVLQD
VYDLPALRGLISDIAERRIRLVETEPAMPSPFARDLLFGYVGAFMYEGDSPLAERRAAAL
AVDPALLAELLGTIEMRELLDPDVIAQHERELQRLDPQRRARGIEGVADLLRQLGPLDAD
EVGARLEPPSIDERAQREGAPAEASAPTARASAFLSELVAARRAIPVTIAGRARFAVIED
AGRLRDALGAALPTGIPVAFLEPVADPLGDLVSRHARTHGPFATVAVAERFGIGTAVARQ
MLQRLESTGRLTSGYFLPASDAEATGEKEWCDAEVLRRLRMRSLAAIRGSVEPVSPETYA
RFLPDWQHLTRPLEGVDGVLNVIEQLAGVPIPASAWESLVLPGRVRDYVPAMLDELTTAG
EVIWTGHGALPGRDGWVSLHPIDLAPFTMPVPEDAPAPGTLEDRVLAALRAQGASFSGAL
RVLTDAENDQSVLDALWSLAWQGRITNDTFAPVRALLTGGAQAHKTVRRAPRTRTYRGVS
LARPTPRPSSAGLGGRWAVLPEITSVSGQAEPAEPADAARRATVTAGLLLDRYGVVTRGA
AQAEGVPGGFAQTYRVLAGFEQAGHCRRGYVIEKLGAAQFAASTTVDRLRTFAGLSDPPP
RRAFTLAATDPANPYGAALPWPRLDAVSHRPGRKAGGLVVLVDGRLVLYFERGGRTVLAF
DDDPEVLRAAAADLVTTARARRLDTLTVEKINGAGIYGTPFANALQEAGFVTTPRGFTLR
KAI
NT seq 4692 nt   +upstreamnt  +downstreamnt
atgagcagcgtactcgatcgcttcacgcccgcgacccaggagtggttccgcggggcgttc
gacgcgccgacgcccgcccaacaaggcgcgtgggaggccgtgtccgctgaccgcagcgca
ctggtggtggcgccgaccggttccggcaagacactgtccgccttcctgtgggcgatcgac
agcgtcttccgtgagcggatggcggagtcggatgccatcgatgcggccgcacgcacgcgc
atcctctacatctcaccgctgaaggccctcggcgtcgacgtcgagcgcaatctgcgttcg
ccgctcgtcggcatcggccagtcggcccgccggctgggtctcgatgtgcccgagatctcg
gtcggtgtgcgctccggagacacgacggcggcggatcgtcgccgtctcgtgagcgcaccg
cccgacatcctcatcaccacccccgagtcgctgtacctgatgctcaccagccgcgccggc
gagacgctgcgcggcgtgcacacggtgatcatcgatgaggtgcacgcggtcgcctcgacc
aaacggggcgcgcacctggcggtgagcctcgagcgcttggacgccctgcgcgcggcgcac
ggcgccgaccgccctgcacagcgcatcgggttgtcggccaccgtgcggccgatcgacgag
gtcgcccgctttctcggcggttcggcacccgtagagatcgtcgcgccgcccgcatcgaag
accttcgagctcgacgtcgtggtgccgctggacgacatgcgaaaccctcccccgccgccg
ggggccgccaccggtggcggcgctgtgtcggccgacgccgctggcgacgacgccgtgctg
accgaggtcaccggatcggtctggccgcacgtcgaagaagcgatcgtcgatcgtgtgctc
cagaaccgctcgacgatcgtgttcgcgaactcccgtcgactggccgagcgcctgacgggg
cggctgaacgagatctacgccgagcggcacgagatcgcgctggctgcacctggggcgccg
cccgccgcgatgatcgcgcagggcgggcagaccgccggggcgccaccggtgctcgccaag
gcgcaccacggttccgtgtccaaagagcagcgcgcccaggtcgaagacgaactcaagtcg
ggtgtgctgcgctgcgcggtcgcgacgagcagcctcgagctcggcatcgacatgggcgcc
gtcgacctggtgatccaggtcgaggctcctccgtcggccgcctcgggtctgcaacgggtc
ggacgcgcagggcaccaggtcggcgagatcagccgtgcggcgctgttcccgaagcaccgc
ggcgacgtgctgcacacagccatcgtcaccgagcggatgctggcgggcaggatcgaggcg
atcaccgtcccccgcaatcccctcgacatcctcgcccagcagaccatcgccgcgtgcgca
ctcgacccgatctccgtcgaggactggttcgagaccgtgcgccgcagcgcccccttccag
acgctgccgcgctcggcgtacgaagccacgctggacctgctcgcaggacgcttcccctcc
gacgagttcgccgagctgcgtccgcggctggtctgggaccgcgatgcgggcacgctcacc
gggcgcccgggggcgcagcgcatcgcggtgaccagcggcggcacgatccccgaccgcggg
ctgttcggagtgttcgtctcgggcgagtcgaccggcgcccgggtcggcgaactcgacgag
gagatggtctacgagtcacgcgtcggtgacgtcttcaccctgggtacgaccagttggcgg
atcgccgagatcacccacgaccgggtcaacgtgctgcctgcgtacggtcaaccgggccgg
gtgccgttctggcacggcgacggcatcggtcgcccgttcgagctcggccaggcactcggg
cgcttctcgcgcgaggtctcgacggcatcacccgacgacgccgaacggcggcttgtcgcc
gccggactcgacgcgaacgcacgcgccaatctgctgggtcatctcgccgagcagcgcgag
gccaccgggacgttgcccaccgaccgcgccctcaccgtcgagcgcggtcacgacgaggtc
ggcgactggcggctgatcctgcattccccgtacggcatgaaggtgcatgcgccctgggcg
ctggcggtgaacgcgcgcgtacgggaacgtctcggagtcgagggatcggccgtggcgagc
gacgacgggatcatcgtgcgcatcccggatgccgagtccgagccgcccggtgccgacctg
ttcgtcttcgaccccgatgaactggagcagctcgtcaccgccgaggtcgggggttccgcg
ctgttcgcctcgcggttccgggagtgcgctgcacgcgcgctgctcatgccgcgcatgaac
ccgaacaagcgcacgccgctgtggcagcagcgtcagcgctcggcgcagctgctcgaagtg
gcgcgccgccacccgacgttcccgatcatcctcgagacgctccgcgaagtgctgcaggac
gtctacgacctgccagcgttgcgcgggctgatcagtgacatcgccgagcggcggatccgt
ctggtcgagaccgagcccgcgatgccgtcgccgttcgcgcgcgacctgctgttcgggtac
gtgggcgcgttcatgtacgagggcgattcgccgctcgccgagcgcagggccgccgcactc
gccgtcgatcccgcactgctggccgagttgctcggcaccatcgagatgcgtgagctgctc
gaccccgacgtgatcgcccagcacgagcgcgagctgcagcgcctcgatcctcagcgccgt
gcgcgcggcatcgagggcgtcgccgacctgctgcgacagctcggaccgctcgatgccgac
gaggtcggtgcgcgccttgagccgccctcgatcgatgagcgagcgcagcgagagggagcg
ccggctgaggcatcggcgccgaccgcacgggcatccgcattcctgtccgagctcgtggcg
gcgcgacgggcgatcccggtcaccatcgccggccgcgcccggttcgccgtcatcgaggac
gccggtcggttgcgcgacgcgctgggcgcggcgctgcccacgggcatccccgtcgcgttt
ctcgagccggtggccgatcccctcggcgacctcgtgtcgcgtcatgcccgcacgcatggc
cccttcgcgaccgtcgcggtcgccgagcgattcggtatcggcaccgcggtcgcccgtcag
atgctgcagcggttggaatcgacgggacggctcacgagcggctacttcctgccggcgtcc
gacgccgaggcgaccggcgagaaggagtggtgcgacgccgaggtgctgcggcgtcttcgg
atgcggtcgctggccgccatccgcggcagcgtcgaaccggtgagcccagagacgtacgcc
cggttcctgcccgattggcagcatctgacgcgccccctcgaaggggtcgacggcgtgctg
aacgtcatcgagcagctcgccggtgtgccgattcctgccagcgcctgggaatcactggtc
ctaccgggccgggtgcgcgactacgtgcccgccatgctcgatgagctgaccacggccggc
gaggtcatctggacgggtcacggcgcgctgccggggcgcgacgggtgggtgtctctgcac
ccgatcgaccttgcaccgttcaccatgccggtgcccgaggatgcgccagcgccgggaacg
ctcgaagaccgggttctcgctgcgctgcgcgcacaaggggcgtcgttctcgggcgctctg
cgggtgttgaccgatgccgagaacgaccagtcggtgctggacgcattgtggtcgctcgcc
tggcaggggcgcatcaccaacgacaccttcgcgccggtgcgcgccctgctgaccggtggt
gcgcaggcgcacaagaccgttcgccgcgctccgcgcacccgcacgtaccgcggcgtctca
ttggcgcgtccgacgccgcgtccgtcgtcggcggggttgggtggtcggtgggcggtgctt
cccgagatcacttccgtctctgggcaggcggagcccgcggagcctgcggatgccgcccgc
cgggccaccgtgacagcgggtctgctactcgaccggtacggggtcgtcactcgcggcgcg
gcacaggccgagggtgttccgggcggcttcgcacagacgtaccgagtgctggccgggttc
gagcaggccgggcactgccgccgcgggtacgtgatcgagaagttgggcgctgcccagttc
gccgcgtcgaccacggtcgacaggctgcgcacgttcgccgggctatccgacccgccaccc
cgccgtgcgttcactctcgccgccaccgaccccgccaatccctacggcgcggccctgccg
tggccgcggctcgacgcggtctcgcaccggcccggccgcaaagcgggcggcttggtcgtg
ctggtcgacggtcgactcgtgctctacttcgaacgcggcgggcgcacggtgctcgccttc
gacgacgaccccgaggtgctgcgcgccgcggccgccgacctcgtcaccacggcccgcgca
cgccggctcgacaccctcaccgtcgagaagatcaacggcgcgggcatctacggcacgccg
ttcgcgaacgcactgcaagaggccgggttcgtcacgaccccgcgcgggttcacattgcgc
aaggccatctga

DBGET integrated database retrieval system