Mesorhizobium sp. AR10: LHFGNBLO_000032
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Entry
LHFGNBLO_000032 CDS
T10612
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu03030
DNA replication
mesu03430
Mismatch repair
mesu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHFGNBLO_000032
03430 Mismatch repair
LHFGNBLO_000032
03440 Homologous recombination
LHFGNBLO_000032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesu03032
]
LHFGNBLO_000032
03400 DNA repair and recombination proteins [BR:
mesu03400
]
LHFGNBLO_000032
Enzymes [BR:
mesu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHFGNBLO_000032
DNA replication proteins [BR:
mesu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHFGNBLO_000032
DNA repair and recombination proteins [BR:
mesu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHFGNBLO_000032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
Baculo_PEP_C
DNApol_Exo
Ino80_Iec3
Motif
Other DBs
NCBI-ProteinID:
UVK38753
LinkDB
All DBs
Position
complement(32339..34504)
Genome browser
AA seq
721 aa
AA seq
DB search
MKVDRHLVLAMLAPGAALAVWLALGCILLLATLDPAQRAAVDVALGPLVPSHGMLPVLWW
LIASTLAAWVAHGLHKAHVATPARLADATRVLIGDAEAPDLIPQGGAAIRDLTGAINALS
GQRRGLQEDMARLVAEASRDVAKQRDQLAALMAELNQSVVVCNLDGRILLYNGRARLLFR
RLSLAPQGAGGAELIGLGRSIYSVIDRLLIAHALETVERRIARGSDAATASARFVTGTPA
GHLLRVSMAPVRPAAANGLELTGFVLLLDDITDEYLAHSQRDRELLELTEASRASFASMQ
AALDMLDYRDLDAEERDRFHKVVRDEVSAMSTRLNALAASTSQDLITRWPLQEMLGVDLL
AAAARRIEAGTGQPVTSDEIDGTLWLSVDSFALIQALAFLAGRLVAAFDRPELRLRLTRA
GGRAHVDIIWSGQDARSEILLGWQTGAMEIGDERSPLSVRDVVDRHGGEVWFERDRVRGL
CFFRFLLPLATGEPVNSPREGSRPEYYDFDLFAASEGSRALDDRLLGEIAYTVFDTETTG
LDPVQGDEILQIGATRIVNGKLLHGECLVQLVDPQRSIPEASIPVHGIRPEMVRGQPTIA
EALPAFHAFASDTVLVGHNVAFDMRFIKLKEAVSGVRFDQPVLDTLLLSSVVHPNEVLHS
LEAIAARLGVSVSGRHTALGDALATAEVFLKLLPLLRQKNIFTLGQAREAAQESYYARLR
Y
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttgaccggcacctcgtgcttgcaatgcttgcgccgggcgcggccctggccgtt
tggctggcgctcggttgcattctgctcctggcgacgctcgaccccgcgcagcgcgcggcc
gtcgacgtcgcgctcggcccgcttgtgccgtcccacggcatgctgccggtgctctggtgg
ctgatcgcgtccacgctggcggcctgggtcgcccacgggctccacaaggcgcatgttgcc
actccggcacggctcgcggacgcgacaagagtgctgatcggcgacgccgaggcgcccgat
ctcattccgcagggtggtgctgcgatccgcgacctgaccggtgcgatcaatgcgctttcc
ggccagcgccgcggcctgcaggaggatatggcgcgcctggtggccgaggcgagccgcgac
gtggcgaagcagcgggaccaactcgccgcgctgatggccgagctgaaccagagcgtagtg
gtctgtaacctcgacggccggatcctgctctacaatggtcgcgcgcggctgctgttccgc
cggctctctctcgcaccgcagggcgccgggggcgctgagctgatcgggctcgggcgttcg
atctacagcgtcatcgatcgcttgctgatcgcgcatgcgctagagacggtagaacggcgc
atcgcccggggtagcgacgccgcgacggcgtcggcgcgcttcgtaaccggcacgcccgcc
gggcacctcctgcgcgtgagcatggcgccggtgcgcccggcggcggccaacgggctggag
ctcaccggcttcgtcctgctgctcgacgacatcaccgacgaatatctggcccattcgcag
cgcgaccgggagctgctcgagctcacagaggcgagccgggcgtcgttcgccagcatgcaa
gccgcgctcgacatgctcgactaccgcgacctcgatgcggaggagcgtgatcgcttccac
aaggtggtgcgcgacgaggtatccgcgatgagcactcggcttaacgcactcgccgcgagc
acgtcacaggatctgataacgcgctggccactgcaggaaatgctcggggtcgacctgctc
gccgccgccgcgcggcggatcgaagcgggtacgggccagcctgtgacgtcggacgagatc
gacgggaccttgtggctcagcgtcgacagcttcgcgctgattcaggcgttggcgttcctc
gcgggccggctcgtcgcggcgttcgaccggcccgagttgcggcttcgtctcacccgcgcc
ggaggccgcgcccacgtcgacatcatctggtcgggccaggacgctcgttccgagatcctt
ttgggctggcagacgggcgcgatggagatcggcgacgagcgctcgccgctgtcagtgcgc
gatgtcgtagatcggcacggcggagaggtctggttcgagcgtgaccgcgtgcgggggctg
tgcttcttccggttcctgctgccattggcaacaggcgagccggtgaactccccccgggag
ggcagccgacctgaatactacgacttcgacttattcgccgctagcgagggcagccgggct
ctcgacgaccggttgctcggggaaatcgcttacactgtcttcgacaccgagaccaccgga
cttgaccccgtgcagggggacgaaatcctgcagatcggagcgacccgcatcgtcaacggc
aagctgctccatggcgagtgcttggtccaactggtcgatccgcaacgcagcattcccgag
gcatccatcccggttcacggcatccggccggagatggtccgcggccagccaacgatcgcc
gaggcgctgcccgcgtttcatgccttcgcttccgacacggtgctcgtagggcacaacgtg
gccttcgacatgcgcttcattaaactcaaggaggctgtgagtggcgtgcgtttcgaccag
cccgtgcttgatacccttctgttgtcgagtgtcgtgcatccgaacgaggtcttgcatagc
cttgaggcgatcgcggcacgcctgggagtgtcggtttccggccgtcatacggctctcggc
gacgcgctagcgacggccgaggtgttccttaaactgctacccctcttgcgccagaagaac
atttttacgctgggacaggcacgcgaggcggcgcaggaatcctactacgcacggcttcga
tattga
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