Mesorhizobium sp. AR10: LHFGNBLO_000287
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Entry
LHFGNBLO_000287 CDS
T10612
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHFGNBLO_000287 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesu03019
]
LHFGNBLO_000287 (pnp)
03016 Transfer RNA biogenesis [BR:
mesu03016
]
LHFGNBLO_000287 (pnp)
Enzymes [BR:
mesu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LHFGNBLO_000287 (pnp)
Messenger RNA biogenesis [BR:
mesu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LHFGNBLO_000287 (pnp)
Transfer RNA biogenesis [BR:
mesu03016
]
Prokaryotic type
tRNA degradation factors
LHFGNBLO_000287 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UVK38978
LinkDB
All DBs
Position
complement(322264..324411)
Genome browser
AA seq
715 aa
AA seq
DB search
MFNHHKVEIEWGGRPLILETGKIARQADGAVLATYGETKVLATVVSMKEPKPGLDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFADGYKNDTQIVVTVVQH
DLENDPDILSIVATSAALTLSGVPFMGPIGGARVGYINGEYVLNPHVDEMQESKLDLIVA
GTTDAVLMVESEARELGEDLMLGAVMFGHRGFQPVIEAIIKLAEVAAKDPRDFTAPDYSA
LEGEMLKIVEGELRDAYKITDKQKRYAAVDAVKAKVKTAFAPAEGEDAKYTSEQIGSVFK
ELQAKVVRWNILDTGSRIDGRDLKTVRKIVSEVGVLPRTHGSALFTRGETQALVVATLGT
GEDEQYVDSLTGMYKEKFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSA
DQFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLIKEGERFAVL
SDILGDEDHLGDMDFKVAGTANGITSLQMDIKIDGITEEIMQIALGQAKDGRLHILDEMS
HALSGARAELGEFAPRIEVMHIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKIA
SSNAKEIEAAKKWIHTIVAEPEVGEIYEGTVVKTADFGAFVNFFGPRDGLVHISQLANDR
VAKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQATGKELARDKKAEGEEHAA
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcaccacaaagtggaaatcgaatggggcggtcgcccgctcattctggaaacc
ggcaagatcgcgcgccaggctgacggcgcggtgctggccacctacggcgaaaccaaggtt
ctcgccaccgtcgtttcgatgaaggagccgaagcccggcctcgatttcttcccgctgacc
gtcaactaccaggaaaagacctatgccgccggcaagatcccgggcggctacttcaagcgc
gaaggccgtccgagcgaaaaggaaacgctggtttcccgcctgatcgatcgcccgatccgt
ccgctcttcgccgatggctacaagaacgacacgcagatcgtcgtcacggtcgtccagcac
gatctcgaaaacgatccggacatcctgtcgatcgtcgccacctcggccgccctgaccttg
tcgggtgttcccttcatgggcccgatcggcggcgctcgcgtcggctacatcaatggcgaa
tacgtgctcaacccgcatgtcgacgagatgcaggaatccaagctcgacctgatcgtcgcc
ggcaccactgatgccgtgttgatggtcgagtccgaagccagggagctcggcgaggatctg
atgctcggcgccgtcatgttcggtcatcgtggcttccagccggtgatcgaggcgatcatc
aagctggccgaagtcgccgccaaggacccgcgcgacttcaccgcgccggattattccgcg
ctcgaaggcgagatgctgaagatcgtcgaaggcgagcttcgcgatgcctacaagatcacc
gacaagcagaagcgttatgccgccgtcgacgccgtcaaggcgaaggtcaagactgcgttc
gcaccggccgaaggtgaagacgccaagtacacgtccgagcagatcggcagcgtgttcaag
gaactccaggccaaggtcgtgcgctggaacatcctcgacaccggctcgcgcatcgacggc
cgcgacctcaagacggtccgcaagatcgtctcggaagtcggcgtcctgccgcgcacgcac
ggctcggcgctgttcactcgcggcgagacccaggcgctggtcgtcgccacgctgggcacc
ggcgaggacgagcagtacgtcgattcgctgaccggcatgtacaaggagaagttcctcctt
cactataacttccctccctattcggttggtgaaaccggccgcatgggttcgcccggccgt
cgcgaaatcggccacggcaagctcgcctggcgcgccattcgtccgatgctgccgagcgcc
gaccagttcccctacacgctgcgcgtcgtctcggagatcaccgaatccaacggttcgtcg
tcgatggccaccgtctgcggcacctcgctggcgctgatggatgccggcgttccgctggcc
aagccagttgccggcatcgccatgggcctcatcaaggaaggcgagcgcttcgcggtgctc
tccgatatccttggtgacgaggatcacctcggcgacatggacttcaaggttgccggcacc
gccaacggcatcacctcgctgcagatggacatcaagatcgacggcatcaccgaggagatc
atgcagatcgcactcggccaggccaaggatggtcgcctgcatattctcgacgagatgtcc
catgcgctgtccggcgcacgtgccgagctcggtgagttcgcgccgcgcatcgaggtcatg
cacatcccgaccgacaagatccgcgacgtgatcggttcgggcggcaaggtcatccgcgag
atcgtggaaaagactggcgccaagatcaacatcgaggacgacggcacggtcaagatcgct
tcctccaacgccaaggagatcgaggcggcgaagaagtggatccacaccatcgttgccgag
ccggaagtcggagagatctacgaaggcacggtcgtcaagaccgccgacttcggcgctttc
gtcaacttcttcggtccgcgtgacggcctcgtccacatctcgcaactcgccaacgatcgc
gtcgccaagacctccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggc
ttcgacgagcgcggcaaggtccgcctgtcgatgaaggtcgtcgaccaggcgaccggcaag
gaactcgctcgcgacaagaaggccgaaggcgaagaacacgccgcctga
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