Mesorhizobium sp. AR10: LHFGNBLO_000290
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Entry
LHFGNBLO_000290 CDS
T10612
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mesu Mesorhizobium sp. AR10
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesu03016
]
LHFGNBLO_000290 (truB)
Enzymes [BR:
mesu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LHFGNBLO_000290 (truB)
Transfer RNA biogenesis [BR:
mesu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LHFGNBLO_000290 (truB)
Prokaryotic type
LHFGNBLO_000290 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UVK38981
LinkDB
All DBs
Position
complement(326289..327266)
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AA seq
325 aa
AA seq
DB search
MGRRGKKKGRPISGWLVLDKPVGMGSTEAVSKIKWLFQAEKAGHAGTLDPLASGMLPIAL
GEATKTVPYVQDGAKIYRFTVAWGDERSTDDLEGPVTQSSDRRPAKADVLALMPKYTGVI
MQTPPQFSAIKISGERAYDLAREGATVDIPAREVEIGRLDLIEHGADQTIFEVECGKGTY
VRSLARDMGRDLGCFGHISELRRVEVEPFTQEDFVTIAELEAARFGEQGDESPESAEVAE
AVEMPVDFSAIDALLVDTSAALECLPQIAISDDAATKIRLGNPVIIRGRDAPVEAEEACA
TARGKLVAIGAIEQGMFKPKRVFAG
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgtcgcggcaaaaagaagggccggccgatctccggctggctggtgctggacaag
cccgtcggcatgggctcgaccgaggccgtctccaagatcaagtggctgttccaggcggaa
aaggccggccatgccggcacgctcgatccgctggcgtccggcatgctgccgatcgcgctc
ggcgaggccaccaagaccgtgccttacgtccaggacggcgccaagatctatcgctttacg
gtcgcctggggtgacgagcggtcgaccgacgacctcgaaggtccggtgacccagagttcc
gaccggcgtccggcaaaagccgatgtgctggcgctgatgccgaaatacaccggcgtcatc
atgcagacgccgccgcaattctcggccatcaagatatcaggcgagcgtgcctatgacctt
gcccgcgagggcgcgacggtcgacattccggcccgcgaagtcgagattggccgcctcgat
ctgatcgagcatggtgccgaccagacgatcttcgaggtcgaatgcggcaagggcacttac
gtgcgctcgctggcccgcgacatgggccgcgacctcggttgcttcggccatatttccgag
ctgcgccgggtcgaggtcgagccgttcacgcaggaggacttcgtcaccatcgccgagctg
gaggccgcccgtttcggcgaacagggcgacgaaagcccggaatcagcggaggttgccgaa
gcggtcgagatgccggtcgacttcagcgccatcgacgcgcttctggtcgacacatcggcg
gcgctcgagtgcctgccgcagatcgccatcagcgacgacgcggcaaccaagatccgtctc
ggcaatccggtcatcatccgcggccgcgacgcgccagtggaagccgaggaagcctgcgcc
acggcgcgcggcaagctggtcgccatcggcgccatcgagcaaggcatgttcaagccgaag
cgggtctttgccgggtga
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