KEGG   Mesorhizobium sp. AR10: LHFGNBLO_001039
Entry
LHFGNBLO_001039   CDS       T10612                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
mesu  Mesorhizobium sp. AR10
Pathway
mesu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mesu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LHFGNBLO_001039 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mesu03021]
    LHFGNBLO_001039 (rho)
   03019 Messenger RNA biogenesis [BR:mesu03019]
    LHFGNBLO_001039 (rho)
Transcription machinery [BR:mesu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     LHFGNBLO_001039 (rho)
Messenger RNA biogenesis [BR:mesu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LHFGNBLO_001039 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 NACHT DnaB_C
Other DBs
NCBI-ProteinID: UVK39647
LinkDB
Position
1107385..1108650
AA seq 421 aa
MQEMKLAEFKNKKPPELIAYAESLEVENASVMRKQELMFAILKKLAAQDVEIIGDGVVEV
LQDGFGFLRSANANYLPGPDDIYISPSQIRRFSLKTGDTVEGPIRSPKEGERYFALLKVN
TINFDDPEKIRHKIHFDNLTPLYPTSRLKMEMEVPTSKDISARVIDLVAPLGKGQRALIV
AQPRTGKTVLLQNIAHSITTNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRIYPA
MDILKSGTRKEDLLVAKQDLQKIFVLRRILAPMGTTDAIEFLIDKLKQTKTNADFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcaagaaatgaaactcgcagagttcaagaacaagaaaccgccagagctgatcgcttat
gccgaatcgctcgaggtggagaacgccagcgtcatgcgcaagcaggagctgatgttcgcc
atcctgaagaaactggccgcacaggacgtcgagatcatcggcgatggtgtggtcgaagtg
ctgcaggacggctttggcttcctgcgctctgccaacgccaactatctgccgggtcccgac
gacatctacatttcaccgtcgcaaatccgccgcttctcgctgaagaccggtgatacggtc
gaaggcccgatccgcagcccgaaagagggcgagcgctatttcgcgctgctcaaggtcaac
acgatcaatttcgacgacccggaaaagatccgccacaagatccatttcgacaatctgacg
ccgctctatccgacgtcgcggctgaagatggaaatggaggttccgacctccaaggacatc
tcggcccgcgtcatcgacctggtggcgccgctcggcaaaggccagcgcgccctgatcgtg
gcgcagccgcgcaccggcaaaacggtgctgctgcagaacattgcgcactccatcaccacc
aatcatccggaatgctatctgatcgtgctgctgatcgacgagcggccggaggaagtcacc
gacatgcagcgttcggtgaaaggcgaggttgtgtcctcgaccttcgacgaaccagccgtg
cgccacgtccaggtcgccgaaatggtcatcgagaaggccaagcgcctggtcgagcacggg
cgcgatgtcgtcatcctgctcgattcgatcacccgccttggccgggcctataacaccgtg
gtcccgtcatccggcaaggtgctgaccggcggtgtcgacgccaacgcgctgcagcggccg
aagcgcttcttcggcgccgcccgtaacatcgaggaaggtggctcgctgaccatcatcgcc
accgcgctcatcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggcaactcggaaatcgtgctcgaccgcaaggtggctgacaagcgcatctatccggcc
atggacattctcaagtccggcacccgcaaggaagacctgctggttgccaagcaagacctg
cagaaaatcttcgtgctgcgccgcatcctggcaccgatgggaacgaccgacgccatcgag
ttcctgatcgacaagctcaagcagaccaagaccaatgcggatttcttcgattcgatgaat
acgtaa

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