Mesorhizobium sp. AR10: LHFGNBLO_001134
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Entry
LHFGNBLO_001134 CDS
T10612
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu00300
Lysine biosynthesis
mesu00470
D-Amino acid metabolism
mesu01100
Metabolic pathways
mesu01110
Biosynthesis of secondary metabolites
mesu01120
Microbial metabolism in diverse environments
mesu01230
Biosynthesis of amino acids
Module
mesu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LHFGNBLO_001134 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LHFGNBLO_001134 (dapF)
Enzymes [BR:
mesu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LHFGNBLO_001134 (dapF)
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Motif
Pfam:
DAP_epimerase
AC_1
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UVK39734
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All DBs
Position
complement(1201877..1202761)
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AA seq
294 aa
AA seq
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MASAAPFAKMNGIGNEIIVADMRGRADQVTAASAVALNADAATKFDQIMAIHDARTPGTA
YYVDILNSDGSGAQACGNGMRCVVQALAAETGQKTFTFETRAGILNAVEHADGTISVDMG
TPRFGWQDIPLAEEFRDTRMIELQIGPIDAPVLHSPSVVSMGNPHAIFWVDQDVWSYELD
RFGPLLENHPMFPERANITLAQVTSPDTMIIRTWERGAGLTKACGSAACASVVAAARTKR
TGRSVTLMTPGGGSLHVEWRGDDHVILTGAAEWEFSGSFDPSTGIWARDTESAA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtgctgcccctttcgccaagatgaacggtatcggcaacgagatcatcgttgct
gacatgcgcggccgcgccgatcaggtcacggcggcgtcggctgtcgcgttgaacgctgat
gcggcgaccaagttcgaccagatcatggcgatccatgacgcgcgcacgcctggtaccgcc
tactacgtcgacatcctgaattccgatggctccggcgcgcaggcctgcggcaatggcatg
cgctgcgtcgtccaggcgctcgccgccgaaaccggccagaagacttttacctttgaaacg
cgcgccggcatcctcaacgccgttgaacatgccgacggcacgatctcggtcgacatgggc
acgccgcgtttcggctggcaggatattccgctggccgaagagtttcgcgacacccgcatg
atcgagctgcagatcggcccgatcgacgcgccggtgctgcattcgccctcggtcgtgtcg
atgggcaacccgcacgccatcttctgggtcgaccaagacgtctggtcctatgagctcgac
cgtttcgggccgctgctcgaaaaccacccgatgtttcccgagcgcgccaacatcacgctg
gcgcaggtaacctcgcccgacacgatgatcatccgcacctgggagcgtggcgccggcctg
accaaggcctgtggttcggccgcttgcgcatcggtggttgccgcggcccgcaccaagcgc
accggccgcagcgtcacgctgatgacccccggtggtggctcgctgcatgtcgaatggcgc
ggcgacgaccatgtcatcctcaccggtgccgccgaatgggaattttccggcagcttcgac
ccgtcaaccggcatctgggcccgcgacaccgaaagcgccgcctga
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