Mesorhizobium sp. AR10: LHFGNBLO_001327
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Entry
LHFGNBLO_001327 CDS
T10612
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHFGNBLO_001327 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesu03019
]
LHFGNBLO_001327 (recQ)
03400 DNA repair and recombination proteins [BR:
mesu03400
]
LHFGNBLO_001327 (recQ)
Enzymes [BR:
mesu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LHFGNBLO_001327 (recQ)
Messenger RNA biogenesis [BR:
mesu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LHFGNBLO_001327 (recQ)
DNA repair and recombination proteins [BR:
mesu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LHFGNBLO_001327 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UVK41449
LinkDB
All DBs
Position
1399952..1401802
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AA seq
616 aa
AA seq
DB search
MQIAATGAPVNEPDPKRRVLKDVFGFDDFRPGQASVMDALLVGRHVLAVMPTGAGKSLCY
QVPALVLGGLTIVVSPLVALMQGQVAALRLAGVAADTINSSLDRDANVAAWRRVAAGQTR
LLYLAPERLMTGRMLEALARLDISLIAVDEAHCISQWGPAFRREYEELSRLRDIFPDVPI
IALTATADESTRTDIEARLFAERVETLVLGFDRPNIKLGIAAKQDGKRQLLNFVERHQGR
SGIVYCLSRKKTEETAAFLEKNGVTALAYHAGMSKEAREANQNAFMTLSGVVMVATIAFG
MGIDKPDVAYVFHTDMPGSLEAYYQEIGRAGRDGREAEAHMLFGLGDIRMRRLFIDDEDA
PAEHKRRSHRRLDTLIGYCETAQCRRQVLLGYFGEDASPCGNCDNCLDQAPRADGATEAR
IILSAIAQSGERFGAAHVIDVLLAHGTDKILARSHHRLASFGTGVAHKKDFWLSLIRQLV
AGGYLMPDPGGHGGLAIAEKGHALGRGEVPFHYRVEERSRALLGKMRSAQGSSADSEGLD
ASLLAALKALRLRLAKEREVPAYVIFSDRTLIDMVERSPRDLDAFAAVNGVGAAKLKEFG
EIFLGAIAAHQSGASA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagcggctactggcgccccggtgaacgagccagatcccaagcggcgtgtcttg
aaggacgtgttcggcttcgacgattttcgtcccggccaggcctctgtgatggacgcgctg
ctggtcgggcgccacgtgttggcggtcatgccgaccggtgccggcaaatcgctctgctac
caggtcccggcgctggttctgggtgggctcacaattgtcgtttcgccgctggttgccctg
atgcagggccaggtcgccgcgttgcgtcttgccggcgtggcggccgacacgatcaattcc
tcgctcgaccgcgatgccaatgtagcggcatggcgccgcgttgccgcgggccagacacgc
ctgctctacctcgcaccggagcggctcatgacagggcgtatgctcgaggcgcttgccagg
ctcgatataagcctgatcgctgtcgatgaggcacattgcatctcccaatgggggccggcg
ttccggcgcgaatatgaagaactgtcgcggctgcgcgacatttttcctgatgtgccgatc
attgcactgaccgcgacagcggacgagagcacgcgcaccgacatcgaagcacggctgttc
gccgagcgtgtcgaaaccttggtgttgggtttcgaccggccgaacatcaagcttggcatc
gcggcaaaacaggacggcaagcggcagttgctgaacttcgtcgagcgtcatcaaggccgc
agcggcatcgtctactgcctgtcacgcaagaaaacggaagagacggctgcgttcctcgag
aagaacggcgtcaccgcgcttgcttaccatgccggcatgagcaaggaggcgcgtgaggcg
aatcaaaacgctttcatgaccttgtccggcgtcgtcatggtggcgaccatcgccttcggc
atgggcatcgacaaacctgacgtcgcctatgtctttcacaccgatatgccgggcagcctg
gaggcctattatcaggaaatcggtcgtgcgggccgcgacgggcgggaggccgaggcgcat
atgctgttcggcctgggcgatatccgcatgcgccggctgttcatcgacgacgaggacgcg
ccggcggagcacaaaaggcgctcacatcgccggctcgatacgctgatcggttactgtgaa
accgcgcaatgccgccgtcaggtgctgcttggctatttcggcgaggacgcgtcgccttgt
ggcaattgcgacaactgcctcgatcaggcaccgcgcgcggatggcgctaccgaggcccgg
atcattctttcggccatagcgcagagcggcgaacgctttggcgccgcccatgtcatcgat
gtcctgctcgcccatggaaccgacaagatcctcgccaggagtcatcacaggctcgccagc
ttcggcaccggagtggcgcacaagaaggacttttggctgtcgctgatccggcagctcgtc
gcgggcggttacctgatgccggatccgggcggtcatggcggacttgccattgcggaaaag
ggccatgcgcttggccgaggcgaggttccattccactatcgcgtcgaggagcgcagccgc
gccttgctcggcaagatgcgttctgcccagggttctagcgcggacagcgaaggcctggat
gcttcgctgctggcagccctcaaggcgctgcggctgcgtctcgccaaggagcgcgaggtg
ccggcctatgtgattttttcagatcgcacgctgatcgatatggtggagcgcagtccgcgc
gacctggacgccttcgccgcggtcaatggcgtcggcgccgcgaagctcaaggagtttggg
gagatttttctgggcgcgatcgctgcgcatcaatccggtgcatcggcatag
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