Mesorhizobium sp. AR10: LHFGNBLO_002228
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Entry
LHFGNBLO_002228 CDS
T10612
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mesu Mesorhizobium sp. AR10
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesu03021
]
LHFGNBLO_002228 (rpoH)
Transcription machinery [BR:
mesu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LHFGNBLO_002228 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UVK40719
LinkDB
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Position
complement(2327311..2328201)
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AA seq
296 aa
AA seq
DB search
MARATTTFLASEGGLIRYLEKIKHLPMLTPEQEQQLAKRWREHNDPEAAHQLVVSHLRLV
AKIAMRYRGYGLPMSEVISEGSIGLIKAVDRFEPERGHRLATYAMWWIKASIREYVLRSW
SLVKMGATPSQKKLFFNLRRLKARISAIDDGDLHPDQVELIASNLGVTEQEVVYVNRRMS
GDTSLNAPLRGQEQGEWQDLLVEGEDNQEYKLVQLEEVSSRHRALMDSLGVLNARERRIL
EARRLADDRRSLGDLSCEFGISRERVRQIEMRAFEKLQDAVKVVYAKRGEARALSA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcaacaacaacatttttggcaagcgaaggtgggcttatccgctatctcgaa
aagatcaaacatctccctatgctgacgccagagcaggaacaacagctggcaaaacgctgg
cgcgagcacaatgacccggaagccgctcaccaactggtggtgtcgcatcttcgcctcgtt
gccaagattgcgatgcgttaccgcgggtacggactgccgatgtcggaggtaatttcggaa
ggcagcatcggtctaatcaaggcggtcgatcgcttcgaaccggagcgcggccatcgtctg
gcgacctatgcgatgtggtggatcaaggcgtccattcgggaatacgtcctgcgctcctgg
tcgctggtgaagatgggcgcgacgcccagccaaaaaaagctgttcttcaatttgcggcgg
ctcaaggctcgcatctcggcgattgacgatggtgacttgcatccagatcaggtggagctg
atcgcaagcaaccttggcgtgaccgagcaggaagtggtttatgtgaatcgccgcatgagc
ggggacacctcgctcaacgcacccctgcggggtcaggaacagggcgaatggcaggatctg
ctggtcgagggggaggacaaccaggagtacaagctcgttcagctcgaggaagtctctagc
cggcatagggctctgatggactcgcttggcgtgctcaacgcacgcgaacggcgcatcctt
gaggcgcggcgacttgcggatgatcgaaggagtttgggagatctgtcctgcgaattcggc
atttcgcgcgagcgcgtgcgccagattgagatgcgtgccttcgaaaaattgcaagatgcc
gtgaaggtggtctatgcgaaacggggcgaagcccgggcgctttcagcatga
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