Mesorhizobium sp. AR10: LHFGNBLO_002600
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Entry
LHFGNBLO_002600 CDS
T10612
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LHFGNBLO_002600 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesu03400
]
LHFGNBLO_002600 (uvrB)
DNA repair and recombination proteins [BR:
mesu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LHFGNBLO_002600 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LHFGNBLO_002600 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
UVK41050
LinkDB
All DBs
Position
complement(2690064..2693156)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAKLPDKKTPPPAGDDRASPPKPRSPLTDFLDASEPLHKGGFAEAPQAEFSGAPLTGSIA
DWAEQIEQEAEKEGRQVVSDKDGGKSPKTAKKIPERSAAAGRTARGTSMGGAASARERTA
AGLNPVAGLDISLEDAETMASGGVTATVAALSALIESGNPLHKDGVLWTPHRPARPEKSE
GGIAIKMVSDFEPAGDQPTAIRDLVEGVNDNDRTQVLLGVTGSGKTFTMAKVIEETQRPA
LILAPNKTLAAQLYSEFKKFFPENAVEYFVSYYDYYQPEAYVPRTDTFIEKESSINEQID
RMRHSATRSLLERDDVIIVASVSCIYGIGSVETYTAMTFQMQIGDRLDQRSLLADLVAQQ
YKRQDINFVRGSFRVRGDTIEIFPAHLEDRAWRISMFGDEIEAITEFDPLTGQKTGELKS
VKIYANSHYVTPRPTLNQAIKSIKEELKHRLQELEKAGRLLEAQRLEQRCRFDLEMLEAT
GSCAGIENYSRYLTGRQPGDPPPTLFEYIPDNALVFVDESHVTIPQIGGMYRGDFRRKAT
LAEYGFRLPSCMDNRPLRFEEWDAMRPLSIAVSATPSAWEMEQAGGVFAEQVIRPTGLID
PPVEVRPAKTQVDDVVGEIRDTTKAGYRTLVTVLTKRMAEDLTEYLHEQGIRVRYMHSDI
DTLERIEILRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIG
RAARNVDGKVILYADQITGSMERAMAETGRRREKQMEWNEANGITPESVKSRISDILDSV
YEKDHVRADISQFTDSAGAMMGNNLKAHLDAMEKQMRDDAANLDFEKAARIRDEIKRLRE
MELSISEDPLAKYADMESPVSGREKGKHNKGVAKHRTSEEQERFRKLDEARAAEEAAKAA
RSNLFHKPALDEMGTDGAVPVKKPLFAKPSLDAMGPGTDMPTPAGAVSRSLFKKQSAQEA
HGSDFGIPGDTTKPLFKKNSLDEMTVRRTETPIEGDKPVKRERAGIGSYEDPADARREKR
RPGKTGRPGK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggccaaactccccgacaaaaagacgccgccgccggcgggtgacgatcgcgcttcgccg
cccaagccgcgcagcccgctgaccgatttcctcgacgcatcggaaccgttgcacaagggc
ggctttgccgaagcgccgcaggccgaattttcaggtgcgccactaaccggctcgatcgcg
gactgggccgagcagatcgaacaggaggccgagaaggaagggcgccaagtcgtttccgac
aaggacggcggcaaatcgccgaagacggcgaaaaagatccccgagcgttccgccgccgcc
ggccgcaccgctcgcggcacctcgatgggcggcgcggcttcggccagggagcgaaccgcc
gccggcctcaatccggtcgccggcctcgacatttcgctggaagatgccgagaccatggcg
tcgggcggtgtcaccgccacggtcgccgctttgtcggcgctgatcgaatccggcaatccc
ttgcacaaggacggcgtgctgtggacgccgcaccgccctgcccgcccggaaaaatcagaa
ggcggcatcgccatcaaaatggtgtcggatttcgagccggccggcgaccagccgacggcg
atcagggatttggtcgagggcgtcaacgacaatgaccgcacccaggtgctgctcggcgtc
accggctcgggcaagaccttcaccatggccaaggtgatcgaggagacgcagcgccctgcc
ctgatcctggcgcccaacaagacgctggccgcgcagctctactccgagttcaagaaattc
ttcccggaaaacgccgtcgagtatttcgtctcctactacgattattaccagccggaagcc
tacgtcccgcgcaccgacaccttcatcgagaaagaatcctcgatcaacgagcagatcgac
cgcatgcgccattcggcgacgcgctcgctgctcgagcgcgacgacgtcatcatcgtcgcc
tcggtgtcctgcatttacggtatcggctcggtcgagacctacaccgcgatgacgttccag
atgcagatcggcgaccgcctcgaccagcgctcgctgctcgccgacctcgtcgcccagcaa
tacaagcggcaggacatcaatttcgtccgcggctcgtttcgcgtgcgcggcgacacgatc
gaaatctttccggcccacctcgaagaccgcgcctggcgcatctcgatgttcggcgacgag
atcgaggcgatcaccgagttcgacccgctgaccggccagaaaaccggcgagttgaaaagc
gtcaagatctacgccaattcgcactatgtgacgccgcgtccgaccttgaatcaagccatc
aagtcgatcaaggaagaactcaagcaccgcctgcaagagcttgaaaaggctggccgactg
ctcgaggcgcagcggttggagcagcgctgccggttcgatctggagatgctggaagccacc
ggctcctgcgccggcatcgagaactattcgcgctatctcaccggtcgccagccgggcgat
ccgccgccgacgctgttcgaatacattcccgacaatgcgctggtcttcgtcgacgagagc
cacgtcaccattccgcagatcggtggtatgtatcgcggcgactttcgccgcaaggcaacg
ctggccgagtatggtttccgtctgccatcctgcatggacaaccggccgctgcgcttcgag
gaatgggacgccatgcgcccgctctccattgccgtttcggccacccccagcgcctgggag
atggaacaggccggcggcgtctttgccgagcaggtcattcgcccgacgggcctgatcgac
ccgccggtcgaggtgcgtccagccaagacccaggtcgacgatgtcgtcggcgaaatccgc
gacaccaccaaggccggctaccgcacgctggtcaccgtgctgaccaaacgcatggcggag
gatttgaccgagtacctgcacgagcaaggcattcgcgtccgttacatgcactccgacatc
gacacgctggagcgcatcgagatcctgcgcgacctgcgcctcggcgccttcgacgtgctg
gtcggtatcaaccttttgcgcgaaggtctcgacattcctgaatgcggtttcgtcgccatt
ctcgacgccgacaaggaaggtttcctgcgctcggaaacctcgctgatccagaccatcggc
cgcgccgccagaaacgtcgacggcaaggttatcctctatgccgaccagatcaccggctcg
atggagcgggcgatggccgaaaccggccgccgccgcgaaaagcagatggagtggaacgag
gccaacggcatcacgccggaatcggtcaaatcgcgcatctccgatattctggattcggtc
tacgagaaggaccatgtccgcgccgacatctcgcagttcaccgacagcgccggcgccatg
atgggcaacaacctcaaggcccatctcgacgcgatggagaaacagatgcgcgacgacgcc
gccaatctcgacttcgagaaggcagcccgcatccgcgacgagatcaagcggctgcgcgaa
atggaactgtcgatctcggaagacccgctggccaaatacgccgacatggaaagcccggtt
tcgggccgcgagaagggcaagcacaataagggcgtggccaaacatcgtacatcagaggaa
caagaacgtttccgcaagctcgatgaggcgcgtgccgccgaagaggcggccaaggcagcc
cggtccaacctcttccacaagccggcgctcgacgaaatgggcaccgatggtgcggtaccg
gtgaagaagccgctattcgccaaaccttcgctcgatgccatggggccgggcaccgacatg
ccgactccggcaggtgccgtatcgcgttcgctgttcaagaaacagtcggcgcaggaggcg
cacggctccgatttcggtattcccggcgacaccaccaagccgctgttcaagaagaactcg
ctcgacgaaatgaccgtgcggcgaaccgagacgccgatcgaaggcgacaagccggtcaag
cgcgaacgtgccggcatcggctcttatgaagacccggccgatgcccgccgcgaaaagcgc
cggcccggcaagacgggcaggccgggaaagtag
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