Mesorhizobium sp. AR10: LHFGNBLO_003829
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Entry
LHFGNBLO_003829 CDS
T10612
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu03020
RNA polymerase
Brite
Enzymes [BR:
mesu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LHFGNBLO_003829 (rpoC)
Transcription machinery [BR:
mesu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHFGNBLO_003829 (rpoC)
DNA repair and recombination proteins [BR:
mesu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHFGNBLO_003829 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UVK36861
LinkDB
All DBs
Position
3987332..3991528
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEVMNLFNPQAPAQVFDSIRISLASPEKILSWSFGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGVICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGTLLDMTLKDIERVLYFENYIVTEPGLTALKEHQLLSEEEYMIAVDEYGEDSFTA
MIGAEAIHDLLAGMDLEKIAGDLRSELASTTSELKQKKYLKRLKVVENFMESGNRPEWMI
MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIVRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG
PELKLHQCGLPKKMALELFKPFIYARLDAKGFSSTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPASGAPIIVPSQDMVLGLYYLSIVNQNEPGEGMVFADMGELQHALE
TKAVTLHSKIKGRFRTVDAEGKVVSKIHDTTPGRMIIGELLPKNVNVPYETANQEMTKKN
ISKMIDTVYRHCGQKETVIFCDRIMALGFSHACRAGISFGKDDMLIPDAKIKLVSDTEAL
AKEYEQQYNDGLITQGEKYNKVVDAWAKCSEKVADEMMARIKAVEFEDNGRQKPMNSIYM
MSHSGARGSPTQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIVNSVDCGTDKGLTMQPIVDAGQVVASVGQRVLGRTS
LDDITHPVSGEVLVKAGTLMDERDVEQIEKAGVQSVRIRSALTCEVRIGVCAVCYGRDLA
RGTPVNQGEAVGVIAAQSIGEPGTQLTMRTFHMGGTAQVVDSSFLEASYEGKVEIRNRNV
VRNSDGQQMVMGRNMAVLILDEAGKERATHRVTYGSRIFVDDGDKVKRGQRIAEWDPYTR
PVLTEIEGKVQFEDLVDGISVQETADESTGITKREVIDWRSTPRGNDLKPAMVVLDAKGK
VGKLSKGGDARFLLSVEAILSVEPGAQVRPGDVLARIPMESAKTKDITGGLPRVAELFEA
RRPKDHAIIAEIDGTIRFGRDYKNKRRIIIEPHDSTLEPVEYLIPKGKPFHLQDGDVIEK
GDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVSINDKHIEVIVRQMLQKVEI
TVQGDSTYIPGDHVDVIELEEVNERLVEDGKKPAEGQPVLLGITKASLQTPSFISAASFQ
ETTRVLTEAAVAGKTDMLQGLKENVIVGRLIPAGTGGTMSQIRRIATSRDELIIDERRKA
SGVEVAEPMLTDMVTAAQ
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaggtcatgaatctcttcaatccccaggcgcctgcgcaggtgttcgattcc
atccggatctcgctcgcgagccctgagaagattctgtcctggtcgttcggcgagatcaag
aagccggagaccatcaactatcgtactttcaagccggagcgcgacggcctgttctgcgcg
cgcattttcggtccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcatgaag
tacaagggcgtcatctgcgagaagtgcggcgtcgaagtcacgctgtcgcgcgtccgtcgt
gagcgcatgggccatatcgagctggcggcacctgtcgcgcacatctggttcctgaagtcg
ctgccgtcgcgcatcggcacgctgctcgacatgacgctgaaggatatcgagcgggttctc
tacttcgagaactacatcgtcaccgagcctggccttaccgcgcttaaggagcatcagctc
ctcagcgaggaagagtacatgatcgccgtcgacgaatatggcgaggatagtttcaccgcc
atgatcggcgccgaggccatccacgaccttctggccggcatggacctggagaagatcgcc
ggcgacctgcgttcggagctggcttcgaccacgtcggagctcaagcagaagaagtatctg
aagcggctcaaggtcgtcgagaacttcatggagtccggtaaccgtccggaatggatgatc
atgaaggtggttccggtgatcccgccggacctgcgcccgcttgtcccgctggacggcggc
cgttttgccacgtcggacctgaacgatctgtatcgccgcgtcatcaaccgcaacaaccgc
ctgaagcggctgatcgagctgcgtgcgcccggcatcatcgtgcgcaatgaaaagcgcatg
ctgcaggaagccgtcgacgccctgttcgacaacggccgccgtggccgtgtcatcaccggc
gccaacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccggttc
cgccagaacctgctcggcaagcgcgtcgactattccggccgttcggtcatcgtgaccggt
ccggagctcaagctgcaccagtgcggcctgcccaagaagatggcgctcgaactgttcaag
cccttcatctacgcccgcctcgacgccaagggtttctcctcgaccgtcaagcaggcgaag
aagctggtcgagaaggagcgtccggaagtctgggatatcctcgacgaggtcatccgcgag
catccggtgctcttgaaccgcgcgccgacgctgcaccgtctcggcatccaggcgttcgag
ccgatcctgatcgaaggcaaggcgatccagctgcatccgctggtctgcacggccttcaac
gccgacttcgacggcgaccagatggccgttcacgtgccgctgtcgctggaagcgcagctt
gaagcccgcgtgctgatgatgtcgaccaacaacatcctgcacccggcttccggcgcgccg
atcatcgtgccgtcgcaggacatggttctgggtctctactatctgtcgatcgtcaaccag
aacgagccgggcgaaggcatggtgtttgctgacatgggcgaactccagcacgcgctcgag
accaaggcggtgacgctgcactccaagatcaagggtcgtttccgtacggtcgacgccgaa
ggcaaggtcgtgtcgaagatccatgacaccacgcctggccgcatgatcatcggcgaactt
ctcccgaagaacgtcaacgtgccttacgagaccgccaaccaggagatgaccaagaagaac
atctccaagatgatcgacaccgtctaccgccattgcggtcagaaggagacggtcattttc
tgcgaccgcatcatggcccttggcttcagccacgcctgccgcgccggcatttcgttcggc
aaggacgacatgctgatcccggacgccaagatcaagctggtctccgacaccgaggctttg
gccaaggaatacgagcagcagtacaatgacggcctgatcacgcagggcgagaagtacaac
aaggtcgtcgacgcctgggccaagtgctcggaaaaggtcgccgacgaaatgatggcccgt
atcaaggcggtcgagttcgaggacaatggccgtcaaaagccgatgaactcgatctacatg
atgtcgcactccggtgcgcgtggctcgcccacccagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggtgaaatcatcgagacgccgatcatctcgaacttcaag
gaaggtctgaccgtgctcgagtacttcaactcgacccacggcgcccgcaagggtctggcc
gataccgccttgaagacggcgaactcgggctacctcacccgtcgtctggtcgacgtggcg
caagactgcatcgtcaactccgtcgactgcggcaccgacaagggcctcaccatgcagccg
atcgtcgatgccggccaggtcgtcgcttcggtcggccagcgcgtgctgggccgtacgtcg
ctcgacgacatcacccatccggtgtcgggcgaggttctggtcaaggccggaacgctgatg
gacgagcgtgacgtggaacagatcgaaaaggccggcgtgcagtcggtccgcatccgctcg
gcgctgacctgcgaggtcaggatcggcgtctgcgcggtctgctacggacgcgatcttgcc
cgcggcacccctgtcaaccagggcgaggctgtcggcgtcatcgcggcgcagtcgatcggc
gagccgggcacccagctcaccatgcgtaccttccacatgggcggtaccgcgcaggtggtg
gatagctcgttccttgaagcctcgtatgagggcaaggtcgagatccgcaaccgcaacgtg
gtgcgcaactccgacggccagcagatggtcatgggccgcaacatggcggtgctgatcctc
gacgaagccggcaaggagcgcgccacgcaccgcgtgacctatggttcgcgtatcttcgtg
gacgatggcgacaaggtgaagcgcggccagcgcatcgccgagtgggatccctatacccgc
ccggtcctcaccgaaatcgagggcaaggtgcagttcgaggatctggtcgacggcatttcc
gttcaggaaacggccgacgagtcgaccggcatcaccaagcgcgaggtcatcgactggcgc
tcgacgccacgcggcaacgacctcaagccggcgatggtcgttctcgacgccaagggcaag
gtcggcaagctgtcgaagggtggcgatgcccgcttcctgctctcggtcgaggccattctt
tcggtcgagccgggtgcacaggttcgccccggcgacgtgctggcgcgtatcccgatggaa
agcgccaagaccaaggacatcaccggcggtctgccgcgtgttgccgaactgttcgaggca
cgtcgtccgaaggatcacgccatcatcgccgagatcgatggcacgatccgcttcggccgc
gactacaagaacaagcgccgcatcatcatcgagccgcatgactcgacgcttgagccggtc
gaatacctgatcccgaagggcaagccgttccatctccaggacggcgacgtcatcgagaag
ggcgactacatcctcgacggcaatccggcgccgcatgacatcctggcgatcaagggcgtg
gaggcacttgcttcctacctcgtcaacgagatccaggaagtctatcgcttgcagggcgtg
tcgatcaacgacaagcacatcgaggtgatcgttcgccagatgctgcagaaggtcgagatc
accgtgcagggcgactcgacctacattccgggcgaccacgtcgacgtgatcgaactggaa
gaggtcaacgagcgcctggtcgaggacggcaagaagccggccgaaggccagccggtgctc
ttgggcatcaccaaggcctcgctgcagacgccgtccttcatctcggccgcctccttccag
gagacgaccagggtgctgaccgaagcggcggttgccggcaagaccgacatgctgcagggg
ctgaaggaaaacgtcatcgtcggccggctgatcccggccggtaccggcggcacgatgagc
cagatccggcgcatcgcaacctcgcgcgacgagttgatcatcgacgagcgccgcaaggcg
tcgggcgtcgaggtcgccgagccgatgctgaccgacatggttaccgccgcgcagtag
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