Mesorhizobium sp. AR10: LHFGNBLO_003863
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Entry
LHFGNBLO_003863 CDS
T10612
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LHFGNBLO_003863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mesu03021
]
LHFGNBLO_003863
03400 DNA repair and recombination proteins [BR:
mesu03400
]
LHFGNBLO_003863
Enzymes [BR:
mesu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LHFGNBLO_003863
Transcription machinery [BR:
mesu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LHFGNBLO_003863
DNA repair and recombination proteins [BR:
mesu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LHFGNBLO_003863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
UVK36894
LinkDB
All DBs
Position
4012654..4013664
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIAGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVLAGDIQTVG
DVEILNPDHVICTLDEGAEIRMEFTVDTGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLTMTIDTDGSISGEDAVAFAARILQDQLGLFVNFDEPQKEVAA
EQVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLAAMGLHLGMEVPDWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaaaaattggcaggaactgatcaagccgaacaagatcgagttctcgtcgaag
aagaagacgctgaccacgctggtcgccgagccgctcgagcgcggctttggtctcacgctc
ggcaacgcgctgcgccgcgtgcttctgtcttcgctgcgtggcgcggctgtgaccgccgta
cagatcgacggcgttctgcatgaattctcgtccatcgccggtgtgcgcgaggacgtgacc
gacatcgtcttgaacatcaaggaaatcgccatccgcatggaaggcgatggccccaagcgc
atggtcgtgcgcaagcagggaccaggtgcggttctcgccggcgacatccagacggttggc
gacgtcgagatcctcaatcccgaccacgtcatctgcacgctggacgagggcgctgaaatc
cgcatggaattcaccgtcgacaccggcaagggctacgtgccggccgaccgcaaccgcgcc
gaagacgcgccgatcggcctcatcccggtcgacagcctctattcgccggtcaagaaggtc
tcctacaaggtcgagaacacccgcgagggccaggttctcgattacgacaagctgaccatg
accatcgacaccgacggttcgatctcgggtgaggacgctgtggcgttcgctgcccgcatc
ctgcaggaccagcttggcctgttcgtcaatttcgacgagccgcagaaggaagttgccgcc
gagcaggtgaccgaacttgccttcaatccggcgctgctgaagaaggtcgacgagctcgag
ctttcagtgcgttcggccaactgcctgaagaacgacaacatcgtctatatcggcgacctg
atccagaagaccgaagcggagatgctgcgcaccccgaacttcggccgcaagtcgctgaac
gagatcaaggaagtcctggcggcgatgggcctgcacctcggcatggaagtgccggactgg
ccgccggaaaacatcgaagacctcgccaagcgctacgaagatcaatattga
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