Mesorhizobium sp. AR10: LHFGNBLO_003955
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Entry
LHFGNBLO_003955 CDS
T10612
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mesu Mesorhizobium sp. AR10
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mesu03009
]
LHFGNBLO_003955 (rimO)
Enzymes [BR:
mesu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LHFGNBLO_003955 (rimO)
Ribosome biogenesis [BR:
mesu03009
]
Prokaryotic type
ribosomal protein modification factors
LHFGNBLO_003955 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
UVK36975
LinkDB
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Position
4107729..4109045
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AA seq
438 aa
AA seq
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MSAAPRVSFVSLGCPKALVDSERIITRLRAEGYEIARKHDGADLVVVNTCGFLDSARDES
LNAIGSALSENGRVIVTGCLGAEPDVIRERHPNVLAITGPQAYESVMAAVHEAAPPSHDP
YIDLLPPQGVKLTPRHYAYLKISEGCNNRCTFCIIPSLRGDLVSRPAADVLREAEKLAKA
GVKEILVISQDTSAYGIDIKYQTSMFGDREVRAKFLDLSEELGQLGVWVRMHYVYPYPHV
ADVIPLMAEGKILPYLDIPFQHASPQVLKNMRRPAHGEKTLDRIRGWRDICPDLAIRSTF
IVGFPGETDDDFEMLLDWLDEAKIDRAGCFKYEPVRGARSNDLGLEQVPQEIKEARWHSF
MQRQQKISATQLAKKVGKRLPVLIDEAHGTSAKGRTKYDAPEIDGSVHIQSRRPLRAGDI
VTVKIDRADPYDLYGSAV
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagccccccgcgtcagtttcgtcagtcttggatgcccgaaagccctcgtggat
tcggagcgcatcatcacgcgcctgcgcgccgaaggttacgagatcgcgcgcaagcatgac
ggtgccgacctggtggtcgtcaacacctgcggcttcctcgattccgcccgcgacgagtcg
ctcaacgccatcggttccgccctttcggagaacggcagggtcatcgtcaccggttgtctc
ggcgccgaaccggacgtcatccgggagagacaccccaacgttctcgccatcaccggtccg
caggcctatgagagcgtgatggcggcggtgcatgaggcagcgcctccgagccacgatccc
tacatcgaccttttgccgccgcaaggcgtcaagctgacgccgcgccactatgcctatctc
aagatctcggaaggctgcaacaatcgctgcaccttctgcatcatcccgtctttgcgcggc
gatctcgtctcgcggccggcggccgacgtgctgcgcgaagctgagaaactggccaaggcg
ggcgtcaaggaaatcctcgtcatttcgcaggacaccagcgcctacggcatcgatatcaaa
taccagaccagcatgttcggcgatcgcgaagtgcgggcgaagttcctcgatctgtcggag
gagctgggccagctcggcgtctgggttcgcatgcactatgtctacccctacccgcatgtc
gcggacgtcatcccgttgatggccgagggaaagatccttccctatctcgacatcccgttc
cagcacgcctcgccgcaggtgctgaagaacatgcgccggccggcgcatggcgaaaagacg
ctcgaccgcattcgcggttggcgcgacatctgcccggatctggccatccgttccaccttc
atcgtcggctttcccggcgagacggacgacgatttcgagatgctgctcgactggctggac
gaggccaagatcgaccgcgccggctgtttcaaatatgagccggtcaggggcgcccgctcc
aacgatctcggcctggaacaggtgccgcaggaaatcaaggaagcgcgctggcacagtttc
atgcagcgccagcagaagatctctgccacccagttggccaagaaggtcggcaagcgcctg
ccggtgttgatcgacgaggcgcacggcacgtcggctaagggccggaccaaatacgatgcg
cctgaaatcgacggctcggtgcacatccagtcgcgccgcccgctgcgtgccggcgacatc
gtcaccgtcaagatcgaccgcgccgacccctatgatctctacggttcagcggtctga
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