Mesorhizobium sp. AR10: LHFGNBLO_005352
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Entry
LHFGNBLO_005352 CDS
T10612
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu00521
Streptomycin biosynthesis
mesu00523
Polyketide sugar unit biosynthesis
mesu00525
Acarbose and validamycin biosynthesis
mesu00541
Biosynthesis of various nucleotide sugars
mesu01100
Metabolic pathways
mesu01110
Biosynthesis of secondary metabolites
mesu01250
Biosynthesis of nucleotide sugars
Module
mesu_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LHFGNBLO_005352 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LHFGNBLO_005352 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LHFGNBLO_005352 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LHFGNBLO_005352 (rfbB)
00525 Acarbose and validamycin biosynthesis
LHFGNBLO_005352 (rfbB)
Enzymes [BR:
mesu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LHFGNBLO_005352 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
UVK38212
LinkDB
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Position
complement(5497502..5498572)
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AA seq
356 aa
AA seq
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MNFLVTGGAGFIGSAVCRHLCANPAYRVTNLDKLTYAGNLASLRPIENAHNYRFEQADIC
DERAVLDILHRDDIDIVMNLAAESHVDRSIDGPGAFIETNIVGTYRILNSALEYWRSLPE
DRKGRFRFHHVSTDEVFGDLPFDSGMFVEETPYAPSSPYSASKAASDHLVRAWHETYGLP
VVLSNCSNNYGPYHFPEKLIPLVILNALDEKPLPVYGAGANVRDWLFVEDHARALELVAT
KGQPGESYNVGGNSERTNLSVVETICDLLDLRRPRKGGKSYRDLINFVTDRPGHDRRYAI
DASKIGRDLGWTPKENFDSGLARTVDWFLDNKWWWAPIREQGYAGERLGDGKKGAA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctggtgactggcggcgccggcttcatcggctcggcggtgtgccggcatttg
tgcgccaatccggcctaccgcgtgaccaacctcgacaagctcacctatgcgggaaacctc
gcctcgttgcgaccgatcgagaacgcgcacaactacaggttcgagcaggccgacatttgt
gacgagcgggcggtcctcgacatattgcaccgcgacgatatcgacatcgtgatgaatctc
gctgccgaaagccatgtcgaccggtcgatcgatgggccgggcgcgttcatcgagaccaac
atcgtcggaacctatcgcattctgaattctgccctggaatactggcgcagccttccggag
gacaggaagggtcgctttcgcttccatcacgtttcgaccgacgaggtgtttggcgatctt
cccttcgacagcggcatgtttgtcgaggagacgccctatgctccctcctcgccctattcc
gcctcgaaggcagcctcggaccatctggtaagagcctggcacgaaacctatggcctgccg
gtcgtcctctccaattgctcgaacaattacgggccctatcactttcccgaaaagctcatc
ccgctggtcatcctgaacgcgctcgacgagaagccgctgccggtctacggcgccggcgcc
aatgtgcgcgactggcttttcgtcgaggaccatgcgcgtgcgctggaacttgtcgcgacc
aagggacagccgggtgaaagctacaatgtcggcggcaattcggaacggacaaatctaagc
gtcgtcgagaccatctgcgatcttctcgacctgagaaggccgcggaaaggcggcaaaagc
taccgcgacctgatcaatttcgtcaccgaccggcccggccacgatcgccgctatgcgatc
gacgcctccaagatcggccgtgacctcggctggacgccgaaggagaatttcgacagcggc
ctggcaagaacggtcgactggtttttggacaacaaatggtggtgggcgccgatccgcgaa
cagggctatgccggtgagcggctgggcgatggcaaaaagggcgctgcgtga
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