Mesorhizobium sp. AR10: LHFGNBLO_005711
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Entry
LHFGNBLO_005711 CDS
T10612
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K15861
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LHFGNBLO_005711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mesu03000
]
LHFGNBLO_005711
Transcription factors [BR:
mesu03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LHFGNBLO_005711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
HVO_A0261_N
HTH_11
MarR_2
MarR
LexA_DNA_bind
HTH_24
NirdL-like_HTH
DUF7343
Sigma70_r4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UVK38536
LinkDB
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Position
complement(5897590..5898237)
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AA seq
215 aa
AA seq
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MNAIVDTRVPFEILTALAPQLDVSRDGRPVPLSFFNAGSEIYAQGEKVTSHYQIEFGAVR
IYRLLADGRRQITAFHLAGEIFGFEADLAHHFFAEAIITTGLRTFRPVAGLDISRELLPL
ALRCMVRAQEHLLVVGRQTAIERIAAFLIDMVDRQGELAQIELPMSRQDIGDYLGLTIET
VSRVLSRLRDKGVLRFHGLRTLEIRKPETLRSMCE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgatcgtcgacactcgggtgcccttcgagatcctcaccgccctggccccgcaa
ctggacgtgtcgagagatggccggccggtgccgctctcgttcttcaacgcaggctcggag
atctacgcacaaggcgaaaaggtcacttcccattaccagatcgagttcggcgctgtccgt
atttaccggctgcttgccgatgggcgcaggcagatcacggctttccatctggcgggagag
atctttgggtttgaagctgaccttgcccaccatttctttgccgaggccatcattacgaca
gggctgcgcacattccgcccggtggccggcctcgacatatcgcgcgaactgttgccgctt
gctcttcgctgcatggtgcgggcccaggaacatttgctggtggttgggcggcagacagcg
atcgaacgcatcgccgcttttttgatcgacatggttgaccgccagggagagctcgctcag
atcgagctgccaatgtcccgccaggatatcggcgactacctcggtctcacgatcgagacg
gtatcgcgcgtgctgtcgagattgcgcgacaagggtgtcctaaggtttcatggacttcgc
accctggaaatccgcaagcctgaaacgctccgttccatgtgcgagtga
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