Mesorhizobium sp. AR10: LHFGNBLO_005980
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Entry
LHFGNBLO_005980 CDS
T10612
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
mesu Mesorhizobium sp. AR10
Pathway
mesu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mesu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHFGNBLO_005980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mesu02000
]
LHFGNBLO_005980
Transporters [BR:
mesu02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LHFGNBLO_005980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_25
AAA_29
nSTAND_NTPase5
nSTAND1
AAA_16
RsgA_GTPase
AAA_5
CARF-assoc_HTH
NACHT
Motif
Other DBs
NCBI-ProteinID:
UVK35778
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Position
pMspAR10a:47593..48840
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AA seq
415 aa
AA seq
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MAEADLIDTGISTLFLHLNNNLLTYRRVFVIFLLSEARSNRAISDRGVMTGISVDIRGFT
KEYGNMTVVDGVSLNVAAGSFVTLLGPSGSGKSTLLMGVAGFTRPTRGNIFFGDRDVTVL
PPRQRNIGMVFQNYALFPHMTVAQNIAFPLIQRGVSKAEIAPEVSKMMRLVGLRGMDDRP
VTKLSGGQQQRVALARALVFRPPILLMDEPLGALDKKMREHLQSEIKEIQQVTGTTALFV
THDQDEAMSMSDRIVVLNHGRIEQQGTSAEIYDTPASAFVADFVGEANMLQGSIAESSPQ
GCLVEIGHNLLVCGKSVPGAVLEKGDTVDLIVRPNRISLGPEREPVPGFIPGEMLSSAYL
GESILIRVRLPNDKIITAKLKPEAGQPDTQRVSVTWDYNSSTVFPRRNGASSRGE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
ttggccgaagccgacttgatagatacaggaatctcgacattatttctccatctcaacaat
aatttgttgacgtatcgtcgcgtttttgtcatctttctgttaagcgaagctcggagcaac
cgggccatttccgatcgaggggtaatgactggaataagtgtggacatccgaggtttcacg
aaagagtacggcaatatgaccgtggtcgacggcgtgtctctgaacgtggcggccggcagt
ttcgtgaccctgctaggcccaagcggatcgggtaagagcaccctgttgatgggagttgcc
ggattcacgcgccccacccgggggaatattttttttggtgatcgtgacgttaccgtcctg
ccgcctcggcaacgcaacattggcatggttttccagaattacgcgctgttcccgcacatg
actgtggcccagaacatcgcgttcccacttattcagcgtggagtttccaaggctgagatc
gcaccagaagtctccaagatgatgcgcctggtagggttgcgtggcatggatgaccggccg
gttacaaagctgtccggaggtcagcagcaacgtgtagcgttggctcgcgcgctggtgttc
cgaccccccatcttgttgatggatgagccgcttggtgcgctcgacaagaagatgcgtgag
catctccagtcggagatcaaggaaatccagcaggtaactggcacgacagcgctgtttgtg
acccatgaccaggatgaggccatgagcatgtcggaccggattgtggtgctcaaccacggt
cgcatcgagcagcaggggacctccgcggagatttacgatacgccggccagcgcctttgtg
gccgatttcgtcggtgaagcgaacatgttgcaggggagcatcgccgagtcgagcccccaa
ggatgcttggtagaaattgggcataacctgctcgtgtgcggcaagtcggtacctggcgcc
gttctggaaaagggggacacggttgacctgattgtccgcccgaacaggatcagcctcggt
cccgaacgcgagccggtacctggcttcattccaggggagatgctctcatcagcttaccta
ggtgaatcgatcctgatccgggttcgcctgccaaacgacaaaatcattacagctaaactt
aagcctgaagcggggcagcccgatactcaacgggtaagcgtaacgtgggattacaactcc
agcaccgtctttccccgccggaacggcgccagctccagaggagaataa
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