Mesorhizobium sp. WSM1497: A9K65_017855
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Entry
A9K65_017855 CDS
T04915
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mesw
Mesorhizobium sp. WSM1497
Pathway
mesw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mesw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9K65_017855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mesw03019
]
A9K65_017855
Messenger RNA biogenesis [BR:
mesw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A9K65_017855
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
ARP65034
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Position
3678926..3680596
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AA seq
556 aa
AA seq
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MAKAENAELVFVPLGGVGEIGMNFALYGYGPPSAREWIVIDVGVTFPDASLPGVDLVLPD
TRFIEENLANLRGIIITHAHEDHYGALLDTWPKLKAPVWMTPFSAGLLEAKRQGEQGAPK
IPVTIYRAGEKFTVGPFEIEAIPVAHSIPEPMSLAITSPAGTVIHTGDWKIDPEPTIGPK
TDEARFRAYGDKGVLALICDSTNALREGESPSEVAVGEGLKGVIQAAKGRVAVTTFSSNV
GRIVSIAKAARDAGRQCLVLGRSLKRVIDVAGELGYMDGLPEFIAEEDFGFIPRENLVII
CTGSQGEPLAALAKLSREEMKSVSLTAGDTVVFSSRTIPGNEKAILEIKNRLIDLGVKII
EDGDALVHVSGHPRRSELRKMYEWVRPQIGVPVHGEAAHLVAQGSLMSTSGIGQVAQVRD
GDMLRLAPGPATIMDQVPFGRIYKDGRLIGTDQAMGIRDRRKLSFAGHVAVNVVLDDKYE
LAGDPDLVAIGVAEADGRGESLEDLMIDAAIGAVDSIPRQRRKDLDLVQEAVRRAVRGAA
NEAWGKKPLVTVFVTR
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagcggaaaacgccgaactcgtcttcgtgccgctcggcggcgtcggcgagatc
ggcatgaacttcgctctttacggctacgggccgcccagcgcgcgcgaatggatcgtcatc
gatgtcggagtgaccttccccgatgccagcctgccgggcgtcgacctagtgctgcccgac
acacgcttcatcgaggagaacctcgccaatctgcgcggcatcatcatcacgcatgcgcat
gaagaccattacggcgcgctgctcgacacatggccgaagctgaaggcgccggtctggatg
acgccgttcagcgccggcctgctggaagccaagcggcaaggcgagcagggcgcaccgaaa
ataccggtcacgatctaccgggcgggcgagaaattcaccgtcggccccttcgagatcgaa
gccattccggtcgcgcactcgattcccgagccgatgtcgctggcgatcacctcgccggca
ggcaccgtcatccataccggtgactggaagatcgatccggagccgacgatcgggccgaag
accgacgaggcgcgtttccgcgcctatggcgacaagggcgttctggcgctgatctgcgat
tcgaccaatgcgctgcgcgaaggcgagtcgccttcggaagtggctgtgggcgagggcctc
aagggcgtcatccaggctgccaaaggccgtgtcgccgtcaccacgttctcctccaatgtc
ggacgcatcgtctcgatcgccaaagcggcccgcgatgccggacgccagtgcctggtgctt
ggccgttcgctgaagcgggtcatcgatgtggccggagaactcggctacatggacggtctg
ccggagttcatcgccgaggaggattttggtttcatcccgcgcgaaaacctggtcatcatc
tgcaccggcagccagggcgagccgctggccgcactggccaagctgtcgcgcgaagagatg
aagtcggtgtcgctgacggcaggcgacacagtggtgttttcttcgcgtacgattcccggc
aacgagaaggcgatcctcgagatcaagaaccgtctcatcgacctcggcgtcaagatcatc
gaggacggcgatgcgctggtgcatgtctccggccatccgcggcgcagcgaattgcgcaag
atgtatgaatgggtgcgcccgcagatcggcgttcccgtgcatggcgaggcggcacatctg
gtggcgcagggctcgctgatgtcgacatcgggcatcggccaggtggcgcaggtgcgcgac
ggcgacatgctcaggcttgctcccggcccagccaccatcatggatcaggtgccgttcggc
cgtatctacaaggatggcagactgatcggcaccgatcaggcgatgggcatccgcgaccgg
cgcaaattgtcctttgccggccacgtggcggtcaatgtcgtgttggacgacaaatatgag
cttgccggcgaccccgatttggtcgccatcggcgtcgccgaggccgatggccgtggcgag
tcgctggaagatctgatgatcgatgcggcaatcggcgcggtggactcgatcccccgtcag
cgccgaaaagacctcgacctggtgcaggaagcagtgcggcgcgccgtgcgcggcgccgcc
aacgaagcctggggcaagaagccgctggtgacggtgttcgtcactcgctga
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