Mesorhizobium sp. WSM1497: A9K65_024890
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Entry
A9K65_024890 CDS
T04915
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mesw
Mesorhizobium sp. WSM1497
Brite
KEGG Orthology (KO) [BR:
mesw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesw03016
]
A9K65_024890
Enzymes [BR:
mesw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A9K65_024890
Transfer RNA biogenesis [BR:
mesw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A9K65_024890
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ARP66224
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All DBs
Position
5063062..5064213
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AA seq
383 aa
AA seq
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MHVITTQKELETVLAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLAPDI
DLKPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLSAELARENRAHWLNE
EMEVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQGVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALGKLRTTPKGWERSSTATALLGAVNTALALPKEQMPKLPKSFQPP
EGSSAAAELLKVLLRIVAEKEGVASKVLASSDDIDRIAAEGEDADVPALQGWRRAVFGEA
ALKLVRGEIGIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccagaaagaactcgagaccgttctcgccgctttcgaaaagtcg
gatttcgtcactgtcgacaccgaattcattcgagaaacgacgttttggccgatcctgtgc
ctgatccagatggccgctcccggcgtgacggcactgatcgatccgctggctcccgatatc
gacctgaagccgttcttcaggctgatggccaacgaagctgtggtcaaagtcttccacgcc
gcgcggcaggacatcgaaatcatcgtccatctcggcgatctggttccgcatccagtgttc
gacacgcaagtggcggcgatggtctgcggcttcggcgacagcgtttcctacgatcagctc
gtgcagcgcatcaccggggcccggctcgacaagtcgtcgcgcttcaccgactggcgccac
cggccgctttccgacaagcagctcgactatgcgctggctgatgtcacccatctgatcgag
gtctatcagcacctcagcgccgaactggcgcgcgaaaaccgcgcccattggctcaacgag
gaaatggaggtgctgacctcgcgcgagacctatgatccgcaccccgaggacgcctggaaa
cggctgaagatgcggctgcgcaagccgcaggaactggcgatcgtgcagggcgttgcggcg
tggcgcgagcgcgaggcgcgcgaacgcgacgtgccgcgcggccgcgtactcaaggacgat
gcgatctacgaggtggcgcaacaagcgccgcgcgacgcggcagcccttggcaagctgcgc
actaccccaaaaggctgggagcgctcttcgacggcaacggcgttgcttggcgcggtcaac
accgcccttgccctgcccaaggagcagatgccaaagctgccgaagagtttccagccaccc
gagggctcgagcgccgcggcggaactgttgaaggtgctgctgcggatcgtcgccgaaaag
gaaggcgtcgcctccaaggtgctggcctccagcgacgacatcgaccgtatcgccgccgag
ggtgaggacgccgacgtaccggccctgcagggctggcggcgcgcggtgttcggcgaggcc
gcgctcaagctggtgcgcggcgagatcggcatcaagttcgacaagcgcaagattgcggtg
ttcgacctgtag
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