Mesorhizobium sp. WSM1497: A9K65_033495
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Entry
A9K65_033495 CDS
T04915
Name
(GenBank) DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mesw
Mesorhizobium sp. WSM1497
Pathway
mesw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mesw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9K65_033495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mesw03400
]
A9K65_033495
Enzymes [BR:
mesw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9K65_033495
DNA repair and recombination proteins [BR:
mesw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
A9K65_033495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
Helicase_C
CarD_TRCF_RID
UvrB_inter
ResIII
AAA_30
SecA_DEAD
AAA_16
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
ARP68302
UniProt:
A0AAC9SF78
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All DBs
Position
pWSM1497:complement(230439..233828)
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AA seq
1129 aa
AA seq
DB search
MRAARNGVAVLTFFWGQGEISVNRHISRTDVEQIDHPDDSGFTIEHGVPPSSAIAAALAG
GLEASRHKHIIHITASERSADEIVGALRQFLPHAEIILLPSWDCLPYDRVWPTRANMGRR
LRALCHMATKPDRARIGVMSIEASLQRVPPAQVIAGGFAILEVGQKFDRDDFRTRSEAFG
YLVDERVDEPGEIAFRGDLMDIFPAGAEDPVRVVLGPDSCIRELKTYDPISQLSDQVRDS
IAVGPASELMFKARDHPELTAMRATSMEERLVALYGAMPSVFDSASSASISFLEGIDGQP
LDKILDLIEDARRARQEAAGREKPLPEQFYLSREEWDASVRNRSTRLAVSAERVPKFFRQ
ARPGYEIAEFVTRQTSAGARVVLTGDASELQRADRLLNRKLGRRAEEAVDLPQILSAARG
SLLKAGFVLDEGFVDAQSGIAMVAAADLFGPALKADAGMAASILEPELRIGDVVVHEDHG
LGVLAAVEQVDLAGQHQDVVRLEYHGGASLLVPVDDFGKIWRYGSEPEAVSLDRLNGEGW
PKRREAALREIDRLAKRLVGLAEMRSSQPAEIIKPSRADLARFAAKFPYTETPDQAAAIR
AVLDDLSSGRTMNRLVCGDVGFGKTEVALRACAAAALCGKQVAVIAPTTVLARQHYETFS
RRFAGTGLQVAHLSRMVGAAKAKAAKEGLRSGQVAIVVGTQALASRSVTFANLGLLVIDE
EHRFGVKLKLALRKMAPCLHTLSMSATPIPRTLQSALSGIQDVSVLNSPPAKRRPVRTIL
AAFDPASVRAALLREFHRGGQSFVVVPRIEDIGPVSDQLNRLVPELGVMTAHGEMKGRQL
DEVMVGFADGDGDILLSTDIIESGLDVPRANTIIVWRPDRFGLAQLHQLRGRVGRGAMQA
AAFLLTEPGVELADGTRARLSTMLALDRLGSGLAISQRDLDLRGAGDLFGEDQAGHMKLI
GVGLYEHLLERAVSAAGEGADPNRQLANINVPAKGAFPESYVNEPTVRVGLYARLSRIRS
DLDLDAFSEELEDRFGDMPGEVTVLLELTRLRIAASELGVGKVDVGPEAVAITLRNKPLA
SRWRDRKVLGLEYRNGRVIFRRIEPRVSDIDAVRLALDAIRAVQPKHEV
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgccaggaacggggtcgctgtgctgacgttcttctggggacaaggtgagatt
tcagtgaacaggcatatttcgcggacggatgtcgaacaaatcgatcacccggatgacagc
gggtttacgatagagcacggcgtcccgccatcttcagctatcgcggcagcgctggccggt
gggctggaggccagccggcacaagcacattatccatataactgcctcggaacgcagcgcc
gacgagatcgtcggggctttgcgtcagttcctgccgcacgcggagatcatcttgctgccg
tcctgggattgcctgccttacgacagggtgtggcccacacgcgccaatatggggcggagg
cttcgtgcgttgtgtcacatggcaacgaagcccgatcgtgcgcgcatcggtgtaatgtcg
atcgaagccagtctgcagcgggtgccgcccgcccaggtcattgctggcggtttcgcaatt
ctggaggtgggacaaaagttcgaccgggatgatttcagaacaaggtccgaagcttttggc
tatctcgtcgacgagagggtcgacgaaccgggtgaaatagcttttcggggcgatctcatg
gacatcttccccgctggcgcggaggaccccgttcgcgtcgtccttggcccagacagctgc
attcgagagctcaagacctacgatccgatcagtcagctcagcgaccaggttcgagactcg
attgctgtcggaccggcatccgagctgatgtttaaagctcgtgatcatcctgagctgaca
gcgatgcgcgcgacgtcgatggaagagcgcctggtcgcattatatggcgcgatgccatct
gtcttcgacagtgcgtcgagcgcctcgatctccttccttgaagggatcgacgggcagccg
ctcgacaaaattctggacctgatcgaggatgcacgccgtgccaggcaggaggctgccggg
cgcgagaaacctttgccggaacaattctatctgtcgcgtgaagagtgggatgcttccgtg
cgcaaccgctccacgagacttgccgtttctgccgagcgagttcccaaattctttcgccag
gcccggcccgggtacgaaatcgctgaattcgtgacaaggcagacaagcgccggggccagg
gtggtgttgaccggcgatgcctctgaactgcagcgagcagatcgcctgctcaatagaaag
ctaggccggagggctgaggaagcggtcgacttaccgcaaatactttcggccgcgagaggc
tctcttctcaaggctggcttcgtcctcgatgaagggtttgtcgacgcgcaatccggtatc
gcgatggtcgccgcagccgacctgtttggccctgcgttgaaggcggatgccggcatggcc
gcaagcatactcgaacccgagttgcgcatcggcgacgtcgtcgtccatgaagaccatggc
ctgggcgtgctcgcggcggtcgaacaggtcgacttggctggtcagcaccaggatgttgtc
aggctggaatatcatggcggggcttccttgctggttccggtcgacgactttgggaaaata
tggcgctacggctcggaaccggaggcagtgtcgctcgatcgcctcaacggcgagggctgg
cccaagcgacgcgaggctgcgttgcgcgagatcgacaggctggccaagcgcctggtgggc
cttgccgagatgaggtccagccagcccgccgagatcatcaagccctcccgcgcggacttg
gcccgttttgcggcgaaatttccctataccgagactcctgaccaggccgccgccatccgc
gctgtgctcgacgacctttcctcggggagaacaatgaaccggctcgtctgcggtgatgtt
ggcttcggcaagacagaggtggctttgcgtgcttgcgccgccgccgccctctgcgggaaa
caggttgcggtcatagcgccgacaaccgtgttggcacgacagcactatgagacgttcagc
cgccgtttcgcaggaacgggcctgcaggtcgcccacctgtcaaggatggtcggggcagca
aaggcaaaagcggcaaaggagggcctgcggagcggccaggttgcgatcgtcgtgggtact
caggccttggcgtccaggagcgtcacattcgccaatcttggactgctggtgattgacgag
gagcaccggttcggcgtcaagttgaagctggccctgcggaagatggcgccctgccttcac
acgctgagcatgagcgccacgccgataccgcggacgctgcaatcggcgctgtcgggcatc
caggatgtcagcgttctaaactctccgcccgccaaaagacgtcccgtccgcacgatactg
gcggcgttcgatccagcatcggtgcgcgcggccctcttgcgtgaatttcacaggggtgga
cagagtttcgtcgtggttcctcgcatcgaggacattggcccggtctctgaccaactgaac
aggctggtgccggaactcggcgtcatgacggcgcacggtgaaatgaaagggaggcagctg
gacgaagtcatggtcggattcgctgacggtgatggcgacattttgttgagcaccgacatc
atcgagagtgggctcgatgtgcctcgagccaacaccatcattgtctggcgcccggaccgg
ttcggtctggcgcagttgcaccagctacggggtcgggtcggtagaggagcgatgcaagcg
gctgcgtttcttctgacggaacctggcgttgagctggccgacggcaccagggcccggctt
tcgacaatgcttgcgctcgatcggcttggctccggcctggcaatcagtcaaagggacctc
gacctgcgcggcgccggcgatctgttcggcgaagatcaggctgggcatatgaaactgatc
ggagtgggcctctacgagcacttgctggagcgggcggtctcggcggctggagaaggggcc
gaccccaacaggcaacttgccaacatcaacgtgcctgcaaaaggggcttttcccgaaagc
tatgtaaacgagcctactgtccgtgttggcctctatgcgcggctctctcgtattcgttct
gacttggaccttgatgcattcagcgaggagctcgaggaccgctttggcgacatgcctggc
gaagtgaccgttctgctggaacttaccaggttgcggatagcagcgtcggaactgggtgtc
ggcaaagttgatgttgggcccgaagccgtcgcgatcaccttgcgcaacaagcctctggcg
tcacgatggcgggacaggaaggtgttgggcctggagtaccgaaacggccgcgtgattttc
aggcggatcgagccccgcgtctcagacatcgatgccgtccgcttggcgctagatgccata
cgtgcagttcagccaaagcacgaggtctga
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