Mesorhizobium sp. 131-2-1: MesoLj131a_31870
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Entry
MesoLj131a_31870 CDS
T11814
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mesx Mesorhizobium sp. 131-2-1
Brite
KEGG Orthology (KO) [BR:
mesx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mesx03032
]
MesoLj131a_31870 (topA)
03400 DNA repair and recombination proteins [BR:
mesx03400
]
MesoLj131a_31870 (topA)
Enzymes [BR:
mesx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MesoLj131a_31870 (topA)
DNA replication proteins [BR:
mesx03032
]
Prokaryotic type
DNA Topoisomerases
MesoLj131a_31870 (topA)
DNA repair and recombination proteins [BR:
mesx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MesoLj131a_31870 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
BCG94323
LinkDB
All DBs
Position
complement(3321039..3323606)
Genome browser
AA seq
855 aa
AA seq
DB search
MDVVVVESPAKAKTINKYLGKNYKVLASFGHVRDLPAKDGSVRPDEDFAMSWSVDTASGK
RLADIAKAVKDADGLILATDPDREGEAISWHVLEVLKQKRALKDKPVSRVVFNAITKASV
LDAMANPRQIDVPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIERFIREEYWQIAAILNTPRNDSFEARLTAFAGKKLQKLDIANKAQADDIKAMLEGA
VFKALSVEAKPTKRNPGPPFTTSTLQQAASSGLGFSATRTMQVAQRLYEGMDIGGETAGL
ITYMRTDGVQMAPEAIDAARDAIVSEFGPKYLPEKPRFYTTKAKNAQEAHEAIRPTDFKR
TPASVRQYLDADQARLYELIWKRAIASQMQPAEIERTTVEIEAVNGARTAELRAVGSVVR
FDGFIAAYTDQKDEDAEDEESRRLPEIRAGEQLARQAINATQHTTEPPPRYSEASLIKKL
EELGIGRPSTYTAILKTLEDRDYVTIDRRKLVPQAKGRLLSAFLESFFERYVEYDFTASL
EEKLDEISDGKLAWKDVLRDFWKDFSGAVDDIKELRVTDVLDALNDELAPLVFPAREDGS
NPRICPKCGTGNLSLKLGKFGAFVGCSNYPECSFTRQLGDAANPNGENGNGEDGTRLIGK
DPYTAEEITLRSGRFGPYIQRGEGKEAKRSSLPKGWTAEQIDHEKALALLALPRDVGKHP
ESGKMISAGLGRYGPFVLHDGTYANLDSIEDVFSIGLNRAVSVIAEKQLKGKGGRNGATP
AALKDLGDHPDGGGKIVVRDGKYGPYVNYGKVNATLPKGKDPQSVTVEDALALIAEKEAK
GGGGKKPFRKAAKKG
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgtcgtcgtcgaatcgccggccaaggcaaagacaatcaacaagtatctcggc
aagaactataaggttctggcctcgttcggtcacgtccgcgatctgccggccaaggatggc
tcggtgcgcccggacgaggatttcgccatgtcctggtcggtcgataccgcctcgggcaag
cgcctcgccgacatcgccaaggcggtcaaggacgccgacggcctgatcctcgccaccgac
ccggatcgcgagggcgaggcgatttcctggcatgtgctggaagtgctgaagcagaagcgc
gcgctgaaggataagccggtcagccgcgtcgtcttcaacgccatcaccaaagcctcggtg
ctggatgcgatggccaatccgcgccagatcgacgtgccgctggtcgacgcctatctcgcc
cgccgtgcgctcgactatctggtcggcttcacgctgtcgccggtgctgtggcgcaagctg
cccggcgcccgctcggccggccgtgtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gaattggagatcgagcgcttcatccgcgaggaatactggcagatcgcggccatcctcaac
acgccgcgcaacgacagtttcgaggcgcggctgaccgcctttgccggcaagaagctgcaa
aaactcgacatcgccaacaaggcgcaggccgacgacatcaaggcgatgctcgaaggtgct
gttttcaaggcactttcggtcgaagccaagcccaccaagcgcaatccgggcccgcccttc
accacctcgaccttgcagcaggccgcctcgtcgggcctcggcttttcggccacccgcacc
atgcaggtggcgcagcgcctctatgagggcatggacatcggcggcgagaccgctggcctg
atcacctatatgcgaaccgacggcgtgcagatggcgccggaggcgatcgacgccgcccgc
gatgccatcgtcagcgaattcggtccgaaatacctgccggaaaagccgcgcttctacacg
accaaggccaagaacgcccaggaagcgcatgaggcgatccgcccgaccgatttcaagcgc
acgccggcatctgtccggcaatatctcgatgccgaccaggcccgcctctacgaactgatc
tggaagcgcgccatcgccagccagatgcagccggccgagatcgagcgcaccacggtcgaa
atcgaggcggtcaacggcgcccgcaccgccgagcttcgcgccgtcggttcggtggttcgc
ttcgacggcttcatcgccgcctataccgaccagaaggacgaggatgcggaggacgaggaa
agccgccgcctgcccgagatccgcgccggcgaacagcttgcccgccaggcgatcaacgcc
acccagcacaccaccgagccgccgccgcgctattccgaagcgtcgctgatcaagaagctg
gaagagctcggcatcggccgcccgtcgacctacacggcgatcctgaaaacgctggaagac
cgcgactacgtcaccatcgaccgccgcaagctggtgccgcaggccaagggccgtctgctg
tcggccttcctcgaaagcttcttcgagcgctatgtcgaatatgacttcaccgcctcgctc
gaggaaaagctcgacgagatttccgacggcaagctcgcctggaaggacgtgctgcgcgat
ttctggaaggatttttccggcgcggtcgacgacatcaaggaattgcgcgtcaccgacgtg
ctcgatgcgctcaacgacgaattggcgccgctggtgtttcccgcacgggaagacggctca
aatcctcgcatttgcccgaaatgcggcaccggcaacctgtcgctgaagcttggcaagttc
ggcgccttcgtcggctgctcgaattatcccgaatgctccttcacccgccagctcggcgat
gccgccaatcccaatggcgagaacggcaatggcgaggacggcacaaggctgatcggcaag
gacccctacacggccgaggaaatcacgctgcgcagtggccgcttcggcccttatatccag
cgaggcgaaggcaaggaggccaagcgctccagcctgcccaagggctggacggccgagcag
atcgaccatgagaaggcgctggcgctgctggcgctgccgcgcgacgtcggcaagcacccg
gaatccggcaagatgatctcggctggcctcggtcgctacggccccttcgtgctgcatgac
ggcacctacgccaatctcgacagcatcgaggacgtgttctcgatcggcctcaaccgtgcc
gtgtcggtgatcgcggagaaacagctgaagggcaagggcggccgcaatggcgccacgccc
gcggcgctcaaggacctcggcgaccaccccgacggcggcggtaagatcgtcgtgcgcgac
ggcaaatacgggccctatgtcaattacggcaaggtcaatgcgacgctgcccaagggcaag
gatccgcagtcggtgacggtcgaggacgcgctggcgctgatcgccgaaaaagaggccaag
ggcggtggcggcaagaagccgttccgcaaggcggcgaaaaaaggatag
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