Methylocystis sp. SB2: LNB28_00045
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Entry
LNB28_00045 CDS
T10237
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
mesz Methylocystis sp. SB2
Pathway
mesz02024
Quorum sensing
mesz03060
Protein export
mesz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LNB28_00045 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LNB28_00045 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LNB28_00045 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mesz02044
]
LNB28_00045 (secD)
Secretion system [BR:
mesz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LNB28_00045 (secD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
Sec_GG
MMPL
ACR_tran
Slp
Motif
Other DBs
NCBI-ProteinID:
ULO23854
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Position
complement(7553..9145)
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AA seq
530 aa
AA seq
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MLRFSTWKFLAIVAMTVAAVLVVAPSMLSPSHYEELKSRLPSWLTPPTIVLGLDLQGGSH
VTLEVDQADLISTQVKNLRDDVRRILREEKVAISGGIGTTARGVQVRVADPADREKVLPK
LRLLRNSFSGALLGGPSPLDVEASPDGVIRVTVTDAGITDKSRKAVEQSIEVIRRRVDAL
GTREPSIQRQGDDRVLVQVPGLQDPETLKEILGKTAKLEFRLVADPGQNPAEIEELDQVE
QEGKLGVEKQVMVKGEDLTDAQPGFDQQRSGEPVVNFRFNIRGAQAFGEVTSKNVGRLFA
IILDNKIISAPRILTPITGGSGQISGRFTVEQANNLAILLRAGALPAKLNIVEERTVGPG
LGQDSIDAGKRAAYVGAGLVVVYMLVTYGIFGVFANLALFVHIAFIFAGLVLLGSTLTLP
GIAGIVLTIGMAVDSNVLIYERIREENHAGRSILASLDAGFTRAFATIVDSNVTMFVAAA
ILYFLGSGPVRGFAVSLALGILTTIVTAVTMTRMMIAVWYHYARPTKLPI
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgattctcgacctggaaatttctcgccattgtggcgatgactgtcgctgcggtg
cttgtcgtcgcgccgagcatgttgtcgccgtcccattatgaagagctgaagtcgcgcctg
ccctcctggcttacgcctccgaccatcgtgctcggccttgatctgcagggcggctcacat
gtgacgctcgaagtcgatcaggcggatctcatcagcacgcaggtgaaaaatctgcgcgac
gacgtgcgccgaatcctgcgcgaagagaaggtcgctatctccggcggcatcggaacgact
gcgcgcggcgtacaggtgcgcgtcgccgaccctgcggatcgggagaaagtccttccaaaa
ttgcggctgctgcgcaacagcttcagcggcgctctcttgggcgggccttcgccgctcgac
gtcgaggcgtcgccggacggcgtcatccgcgtgaccgtcaccgacgcgggcatcacggac
aaatcgcgcaaggccgtcgagcaatcgatcgaagtcattcggcggcgcgtcgacgccctc
ggcacgcgagagccgagcattcagcgtcagggcgacgaccgcgtgctggtgcaggtgccg
ggccttcaggaccccgagactctcaaggagatcctgggcaaaaccgcgaagctcgaattc
cgcctcgtcgccgatcccggccagaatccggcggaaatcgaggaactcgatcaggtcgag
caggaaggcaagctcggcgtcgagaagcaggtgatggtcaagggcgaggatctcacggac
gcgcagcccggattcgaccagcagagaagcggcgagcctgtcgtcaatttccgcttcaac
atccgcggcgcccaggccttcggcgaagtgacgtccaagaacgtggggcgcctcttcgcg
atcatcctcgacaacaagatcatttccgcgccgcggatcttgacgccgatcaccggcggc
tccggccagatttccggacgcttcaccgtcgaacaggcgaacaaccttgcgatcctgctg
cgcgccggcgcgctgccggcgaagctcaacatcgtcgaagagcgcaccgtcggtccgggc
ctcggccaggactcaatcgacgccggcaaacgcgccgcctatgtcggcgccggcctcgtc
gtcgtctacatgctcgtcacctacggcatctttggcgtcttcgccaatctcgcgctgttc
gtgcacatcgcctttattttcgccggactcgtgctgcttggctcgacgctgacgctgccg
ggcatcgccggaatcgtgttgacgatcggcatggcggtcgactcgaacgtgctgatctac
gagcgcatccgcgaagaaaatcacgccgggcggtcgattctggcctcgctcgacgcgggc
ttcacccgcgccttcgcgaccatcgtcgactccaacgtcaccatgttcgttgcggcggcg
atcctttattttcttggctcgggaccggtgcgcggtttcgccgtgtcgcttgcgctcggc
attctgacgaccatcgtcaccgcggtgaccatgacgcgcatgatgatcgccgtctggtat
cattacgcgcggccgacaaaactgccgatctga
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