Methylocystis sp. SB2: LNB28_00385
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Entry
LNB28_00385 CDS
T10237
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LNB28_00385 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mesz01007
]
LNB28_00385 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mesz03016
]
LNB28_00385 (serS)
Enzymes [BR:
mesz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LNB28_00385 (serS)
Amino acid related enzymes [BR:
mesz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LNB28_00385 (serS)
Transfer RNA biogenesis [BR:
mesz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LNB28_00385 (serS)
Prokaryotic type
LNB28_00385 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
ULO23912
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All DBs
Position
72168..73568
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AA seq
466 aa
AA seq
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MYDIKWIRENAEIFDRGRARRGLEPLSTQLLAFDDARRAAIGELQRAQERRNAASKEIGA
AMKAGDSAKVEALKSEVATIKENWPALEEAERYAIAELDNALASIPNTPLDEVPDGADED
DNIEVARWGEPRVFDFTPKEHFEIGEGLGLMDFETAAKISGARFVVNKGGLARLERALAQ
FMLDLHTNEHGYMEVSPPLLVRDEAMFGTAQLPKFREDQFLATNELFVSEAFNQAVDEFD
KGTLPEDRDVQTRTGQLMQGKNYWLIPTAEVPLTNLVRESILDEAQLPMRMTAGTYCFRA
EAGAAGKDTRGMIRQHQFYKVELVSITTPEDSLEEHERMTGCAEKVLQLLELPYRKVVLC
TGDMGFASQKTYDLEVWLPGQGRYREISSCSVCGDFQARRMNARYRPSESKGKNKGIGFV
HTLNGSGVAVGRAMVAVLENYQQADGSVDVPRVLRPYMGGLTRIPS
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacatcaaatggattcgcgagaacgctgaaattttcgaccgcggtcgcgcgcgg
cgcgggctggagcccctgtcgacgcagcttctcgcctttgacgatgcgcggcgcgcggcg
atcggcgaattgcagcgcgcgcaggagcgccgcaacgccgcctcaaaagagatcggggcg
gcgatgaaggcgggcgacagcgccaaggtcgaagcgctcaagtcggaagtcgcaacgatc
aaggaaaactggccggcgctcgaagaagccgaacgctatgcgatcgccgaactcgataat
gctctggcgagcattcccaacacgccgctcgatgaagtgccggacggcgccgacgaggac
gacaacatcgaagtcgcgcgctggggcgagccgcgcgtattcgacttcacgcccaaagag
catttcgaaatcggcgagggcctcgggctgatggatttcgaaacggcggcgaaaatttcc
ggcgcgcgtttcgtcgtcaacaaaggcggcctcgcgcggctggagcgcgcgctcgcgcaa
ttcatgcttgatctgcatacgaacgagcatggctatatggaggtgagcccgccgcttctc
gtgcgcgacgaagccatgttcggcacggcgcaattgccgaagtttcgtgaggatcagttc
ctggcgacaaatgagctcttcgtcagcgaggctttcaatcaagctgtcgacgagtttgat
aaaggaactcttcccgaggaccgcgatgtacaaactcggaccggccaattaatgcaggga
aagaattactggctcatccccaccgccgaagtgccgctcaccaatctcgtgcgagaatcc
atcctcgacgaagcgcaattgccgatgcgcatgaccgccggcacctattgcttccgcgcc
gaagcgggcgccgccggcaaggacacgcgcggcatgatccgccagcatcagttctacaag
gtcgaactcgtgtcgatcacgacgccggaagattcgctcgaagaacatgagcgcatgacg
gggtgcgccgagaaggtgttgcagcttctcgaactcccctatcgcaaggtcgtgctctgc
accggcgacatgggcttcgcgagccaaaaaacctacgaccttgaagtctggttgccaggg
caggggagatatcgcgagatttcctcctgttcggtctgcggcgacttccaggcgcggcgc
atgaacgcccgctatcgcccgagcgagagcaagggcaagaataagggaatcggcttcgtt
catacgctgaacggctcgggcgtcgcggtcggccgcgcgatggtcgccgtcttggagaac
taccagcaggccgacggctcagtcgacgttccgcgcgtccttcggccttacatgggcggg
ctcacgcgcatcccgagctga
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