Methylocystis sp. SB2: LNB28_00495
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Entry
LNB28_00495 CDS
T10237
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mesz Methylocystis sp. SB2
Pathway
mesz00220
Arginine biosynthesis
mesz00240
Pyrimidine metabolism
mesz00250
Alanine, aspartate and glutamate metabolism
mesz01100
Metabolic pathways
mesz01110
Biosynthesis of secondary metabolites
mesz01240
Biosynthesis of cofactors
Module
mesz_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
mesz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LNB28_00495 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LNB28_00495 (carB)
00220 Arginine biosynthesis
LNB28_00495 (carB)
Enzymes [BR:
mesz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LNB28_00495 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
Fil_haemagg_2
Motif
Other DBs
NCBI-ProteinID:
ULO23933
LinkDB
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Position
complement(97836..101174)
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AA seq
1112 aa
AA seq
DB search
MAKRTDISTIMIIGAGPIVIGQACEFDYSGTQACKALKAEGYRIVLVNSNPATIMTDPDM
ADRTYIEPITPEIVAKIIEKERYAAPGGFALLPTMGGQTALNCALSLEKMGVLKEFDVEM
IGATAHAIDKAEDRELFREAMTKIGLDTPRSHHVKTLSAALEALDDIGLPAIIRPSFTLG
GTGGGIAYNKVEFIEIVERGIDASPTNEVLVEESVLGWKEYEMEVVRDKADNCIIVCSIE
NIDPMGVHTGDSITVAPALTLTDKEYQIMRDASIAVLREIGVETGGSNVQFAVDPSNGRM
IVIEMNPRVSRSSALASKATGFPIAKVAARLAVGYTLDEIANDITGGATPASFEPTIDYI
VTKIPRFAFEKFPGAEPILTTAMKSVGEAMAIGRNFAESLQKALRSLETGLCGLDEIEIE
GFGKGDDMNVLRGALGTPTPDRLLVVGQALRLGMSAEAIHEASKIDMWFIERIAEIVALE
NKVKSYGLPEDAENLRKLKFAGFSDSRLATLTGLDEADVREMRHRLDVRPVYKRIDTCAA
EFASPTAYMYSTYETPFIGSPANEARPSDKNKIVILGGGPNRIGQGIEFDYCCCHACFAL
AEAGFETIMINCNPETVSTDYDTSDRLYFEPLTNEDVAEILDVEKSNGVLVGVIVQYGGQ
TPLKLAHGLEQAGAPILGTPVDSIDLAEDRDRFKRLLDKLGLKQPKNGIAYSVEQSRIVV
QELGLPLVVRPSYVLGGRAMAIIRDQSDLDDYLLGTLPSLVPSEIKARYPNDKTGQINTV
LGKNPLLFDRYLTDAIEIDVDCLADGDEAVVAGVMEHIEEAGIHSGDSACSLPPRSLAPE
TIAALEAQTKSLAMSLGVVGLMNVQFALKDGEIYVLEVNPRASRTVPFVAKVIGSPIAKI
AARVMAGAKLVDFDPLDTKPAHVGVKEAVFPFARFPGVDTVLGPEMRSTGEVMGLDTSFD
AAFVKSQLGGGTKAPREGVVFVSVRDADKGRIIPAVRLLKEVGFSIVATGGTARYLVERG
IPAQKLNKVSEGRPHIVDAIKNGSIALVFNTTEGAQALADSRSLRRAALLHKVPYYTTLA
GAVAAAQGIRAYVSGDLRVRALQDYFPPNATK
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagaaccgacatttccacgatcatgatcatcggcgccggccccatcgtcatt
ggccaggcgtgcgaattcgactattcgggcacccaggcgtgcaaggcgctcaaggcggaa
ggctatcggatcgttctcgtcaactccaatccggcgacgatcatgaccgacccggatatg
gcggaccgcacctatatcgagccgattacgcccgaaatcgtcgccaagatcatcgagaag
gagcgctacgcggcgcccggcggcttcgcgctgctgccgacgatgggcggacagaccgcg
ctcaattgcgcgctcagtctcgaaaaaatgggcgtgctgaaagaattcgacgtcgagatg
atcggcgcgaccgcccatgcgatcgacaaggccgaagaccgcgaactgttccgcgaggcg
atgacgaaaatcggcctcgacacgccgcgctcgcatcacgtcaagacattgtccgccgcg
ctcgaggcgctcgacgatatcggtctgccggcgatcatccgtccgtccttcacgctcggc
ggcacgggcggcggcatcgcgtacaacaaggtggagttcatcgagatcgtcgagcgcggc
atcgacgcctcgccgacgaatgaagtgctggtcgaagagagcgttctcggctggaaggaa
tacgagatggaagtcgtccgcgacaaggcggacaattgcatcatcgtctgctccatcgaa
aacatcgatccgatgggcgtgcacacaggcgacagcatcaccgtcgcgccggcgttgacg
ctgaccgacaaagaataccagatcatgcgggacgcctcgatcgcggtgttgcgcgagatc
ggcgtcgaaaccggcggctcgaacgtgcaattcgcggtcgatccctcaaacggccgcatg
atcgtcatcgagatgaacccgcgcgtgtcgcgttcgtcggcgctggcgtcgaaagccacc
ggcttcccgatcgccaaggtcgccgcgcgtttggcggtcggctacacgcttgacgagatc
gccaacgacattaccggcggggcgacgccagcgtccttcgaaccgacgatcgactacatc
gtcaccaaaattccgcgcttcgccttcgaaaaatttccgggcgccgagccgatattgacg
acggccatgaagtcggtcggcgaagcgatggcgatcggccgcaatttcgccgagtcgctg
caaaaggcgttgcgttcgctggagaccggcctctgcggcctcgacgagatcgagatcgaa
ggcttcggaaaaggcgacgatatgaatgtgctgcgcggcgcgctgggcacgccaacgccg
gaccggctgctcgtcgtcggccaggcgctgcggctcggcatgagcgctgaagccattcac
gaggccagcaagatcgacatgtggttcatcgagcgcatcgcggaaatcgtcgcgctcgaa
aacaaggtcaagagctacgggctgccagaggacgccgaaaatcttcgcaagctcaaattc
gccggcttctccgattcgcgcctcgcgacgcttacgggcctggatgaggcagacgtgcgc
gagatgcgccaccgtctcgacgtgcgacccgtctacaagcgtatcgacacatgcgcggcc
gaattcgcctcgcccacagcctatatgtattcgacctatgagacgccgttcatcgggagc
cccgcgaatgaggcgcggccctcggacaagaacaagatcgtcattctgggcggcgggccg
aaccgcatcgggcaaggcatcgaattcgactattgctgctgtcacgcctgcttcgcgctc
gccgaagccggtttcgagacgatcatgatcaattgcaatccggagacggtttcgacggat
tacgacacttccgaccggctgtattttgaaccgctaacgaatgaagacgtcgccgaaatt
ctcgacgtcgagaagtccaacggcgtgcttgtgggcgtcatcgtgcaatatggcgggcaa
acgccgctgaagcttgcacacgggctcgagcaggcgggcgcgcctattctgggcacgccg
gtcgattcgatcgacctcgccgaggaccgggatcgcttcaaacggcttctcgacaagctg
gggttgaagcagcccaagaacggcatcgcctactccgtcgagcagtcgcggatcgtcgtg
caggagcttggactgccgctcgtcgtgcgcccaagctatgtgctcggcggccgcgccatg
gcgatcatccgcgatcaaagcgatctcgacgattatcttctcggcacgttgccaagcctc
gtgccctccgagatcaaggcgcgctacccgaatgacaagaccgggcagatcaacacggtg
ctcggcaagaatccgctgctcttcgatcgctatctgaccgacgccatcgaaatcgacgtc
gattgtctcgccgatggcgacgaagcggtcgtcgccggcgtcatggaacatatcgaagag
gcgggcattcattcaggcgattcggcctgttcgctgccgccgcgctcgctcgcgccagag
acgatcgccgcgctcgaggcgcagaccaaaagccttgccatgtcgcttggagtcgtcggc
ctgatgaatgtgcaattcgcgctcaaggatggcgagatctatgtgctcgaggtgaacccg
cgcgcctcgcgcaccgtgcctttcgtcgccaaggtgatcggcagccccatcgccaagatc
gcggctcgggtgatggccggcgcgaagctcgtcgatttcgatccgctcgacacgaagccc
gcgcatgtcggcgtgaaagaggctgtcttccccttcgcgcggttcccgggcgtggacacc
gtccttggccccgaaatgcgctcgacgggcgaagtcatgggtctcgacacctcttttgac
gccgctttcgtcaagagccagctcggcggcggcaccaaggccccgcgcgagggcgtcgtt
ttcgtctcggtcagggacgcggacaaaggccgaatcattccggcggtccgcctgctgaag
gaggttgggttctcgatcgtcgccacgggcggcacggcgcgctatctcgtcgagcgggga
attcccgcccagaaactgaacaaggtgtcggagggacggccgcatatcgtcgacgccatc
aagaacggctcgatcgcgctcgtcttcaacaccaccgaaggggcgcaggcgcttgcggac
tcgcgctccttgcgccgcgccgcgcttctgcataaggttccctattatacgaccctggcg
ggggcggtcgcggcggcccagggaatacgcgcctatgtgtctggagaccttagggtccgg
gcgctgcaggactattttccgcccaacgcgaccaagtga
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